DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fit2 and Tln2

DIOPT Version :9

Sequence 1:NP_648947.1 Gene:Fit2 / 39907 FlyBaseID:FBgn0036688 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_006511496.1 Gene:Tln2 / 70549 MGIID:1917799 Length:2559 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fit2NP_648947.1 B41 259..>351 CDD:214604
FERM_M 310..>365 CDD:278785
PH_fermitin 408..536 CDD:269943
PH 408..515 CDD:278594
FERM_M <557..609 CDD:278785
FERM_C_fermitin 603..693 CDD:270026
Tln2XP_006511496.1 FERM_F0_TLN2 6..89 CDD:340692
FERM_F1_TLN2 90..201 CDD:340694
FERM_M 211..318 CDD:395297
FERM_C_Talin 314..405 CDD:269973
Talin_middle 496..657 CDD:401182
I_LWEQ 691..>767 CDD:418644
talin-RS 1047..>1176 CDD:213393
talin-RS 1658..1829 CDD:213393
VBS 1852..1976 CDD:312463
ILWEQ 2339..2549 CDD:214607
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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