DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fit2 and PTPN3

DIOPT Version :9

Sequence 1:NP_648947.1 Gene:Fit2 / 39907 FlyBaseID:FBgn0036688 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_011517190.1 Gene:PTPN3 / 5774 HGNCID:9655 Length:934 Species:Homo sapiens


Alignment Length:331 Identity:54/331 - (16%)
Similarity:116/331 - (35%) Gaps:113/331 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 DVNLSQGKYAIRLEVSP--DGGHGINSEVWV------------------RC-----ENEQQYAKW 506
            |.|.:...|.:.:.::|  ||..|.|.:..|                  .|     |.:|     
Human   520 DKNDNGDSYLVLIRITPDEDGKFGFNLKGGVDQKMPLVVSRINPESPADTCIPKLNEGDQ----- 579

  Fly   507 MAACRLAAKGRSLADSSYESEVDSILSLLQMQRPAH-----------GVHVNIDPRSVEAVDYLS 560
                .:...||.:::.::    |.::..::..|.:|           .|....|.:|.:.::.|.
Human   580 ----IVLINGRDISEHTH----DQVVMFIKASRESHSRELALVIRRRAVRSFADFKSEDELNQLF 636

  Fly   561 PKIIRKLSNKAVQRILEAHANVRELNALDS---KLKYIQAWRSLPDFGVSLFIIK----FDGHRK 618
            |:.|..:..:....:..:.|.:::  .|:|   .:::.|.:|..|  |:::...|    .|.:|.
Human   637 PEAIFPMCPEGGDTLEGSMAQLKK--GLESGTVLIQFEQLYRKKP--GLAITFAKLPQNLDKNRY 697

  Fly   619 EELLGVAHNRIM-------------RMDLSSGDHIKTW-------RYNTMKAWNVNWNIKCMMI- 662
            :::|.....|::             .|::.:.:.:..:       .:...:.|.|.|:.|..:| 
Human   698 KDVLPYDTTRVLLQGNEDYINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIV 762

  Fly   663 --------------QF--EDENVV------FSCHSADCKVVHEFIGGYIFMSMRSKDTNQTLNEE 705
                          |:  :..:|:      ..|.|.||.:.        ::|.....||....||
Human   763 MLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIA--------YVSREMLVTNTQTGEE 819

  Fly   706 LFHKLT 711
              |.:|
Human   820 --HTVT 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fit2NP_648947.1 B41 259..>351 CDD:214604
FERM_M 310..>365 CDD:278785
PH_fermitin 408..536 CDD:269943 15/93 (16%)
PH 408..515 CDD:278594 12/72 (17%)
FERM_M <557..609 CDD:278785 10/54 (19%)
FERM_C_fermitin 603..693 CDD:270026 18/136 (13%)
PTPN3XP_011517190.1 B41 52..243 CDD:214604
FERM_N 54..117 CDD:286467
FERM_M 136..243 CDD:278785
FERM_C_PTPN4_PTPN3_like 237..330 CDD:270010
PDZ_signaling 529..616 CDD:238492 14/99 (14%)
PTPc 670..921 CDD:214550 28/166 (17%)
PTPc 693..920 CDD:238006 23/141 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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