DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fit2 and rhea

DIOPT Version :9

Sequence 1:NP_648947.1 Gene:Fit2 / 39907 FlyBaseID:FBgn0036688 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001246674.1 Gene:rhea / 38978 FlyBaseID:FBgn0260442 Length:2836 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fit2NP_648947.1 B41 259..>351 CDD:214604
FERM_M 310..>365 CDD:278785
PH_fermitin 408..536 CDD:269943
PH 408..515 CDD:278594
FERM_M <557..609 CDD:278785
FERM_C_fermitin 603..693 CDD:270026
rheaNP_001246674.1 FERM_f0 4..85 CDD:293120
B41 89..322 CDD:214604
FERM_N 92..147 CDD:286467
FERM_M 215..322 CDD:278785
FERM_C_Talin 318..409 CDD:269973
Talin_middle 510..668 CDD:286254
I_LWEQ 686..>778 CDD:302998
Vinculin <874..>1035 CDD:279395
talin-RS 1661..1832 CDD:213393
Tar <1694..2005 CDD:223910
VBS 1859..1982 CDD:286057
I_LWEQ 2392..2534 CDD:279885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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