DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fit2 and Fermt2

DIOPT Version :9

Sequence 1:NP_648947.1 Gene:Fit2 / 39907 FlyBaseID:FBgn0036688 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_006251817.1 Gene:Fermt2 / 289992 RGDID:1311799 Length:706 Species:Rattus norvegicus


Alignment Length:747 Identity:325/747 - (43%)
Similarity:471/747 - (63%) Gaps:94/747 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ENSWNLRIFITDLALEKTMRVRGDQHIGGIMLQLVDP-ENPKDWSDHALWWPARNVWLSRTKLTL 69
            :.:|.|.:.:|||..:.|:||.|:.||||:||:||:. :..||||||||||..:..||.:|..||
  Rat    15 DGTWELSVHVTDLNRDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALWWEKKKTWLLKTHWTL 79

  Fly    70 DQCGVQADSLLHFTPMHKILRVQLPDLRYLDSRVDYSVKTFSAVVNLCKQLDIRYPEELSLCKPL 134
            |:.|:|||:.|.|||.||:||:|||:::|:..:|::|.:.|.||.::||..:||:||||||.|. 
  Rat    80 DKYGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICKTFNIRHPEELSLLKK- 143

  Fly   135 EAEHLKRNFAQVPHQKRVPIAEPDGTTYLQPAADTNSFV--PISTSFHGEGGSTGSLDKPSAP-- 195
            ..:..|:...::..|......|.:| ..:.|.:.|:...  |:..|.:   .|.|...|...|  
  Rat   144 PRDPTKKKKKKLDDQSEDEALELEG-PLIMPGSGTDVLYIGPLKGSIY---SSPGLYSKTMTPTY 204

  Fly   196 ----GSFFCAPLSPHNHRARSPVRTVSPFPGTWKQSQLGYATYDSSSSSLGDFQENLASSPPTPC 256
                ||    ||||.:                        |.:..|:.|.|: ...||.|.|...
  Rat   205 DAHDGS----PLSPTS------------------------AWFGDSALSEGN-PGILAVSQPVTS 240

  Fly   257 ADVRALQLRPKSLVEKARLNVGWLDSSLSIMEQGIREYDTLCLRFKYFTFFDLNPKCDQVRINQL 321
            .::.|...:|::|::||:.|.||||||.|:|||.::|.:.|.|||||::|||||||.|.:|||||
  Rat   241 PEILAKMFKPQALLDKAKTNQGWLDSSRSLMEQDVKENEALLLRFKYYSFFDLNPKYDAIRINQL 305

  Fly   322 YEQAKWSVLNEELDCTEEESLMFAALQFQVNHHVDHTPQGAAVDSGIETSSQENDNE----DEID 382
            ||||||::|.||::|||||.:||||||:.:|            ...|.||....:|.    ||:|
  Rat   306 YEQAKWALLLEEIECTEEEMMMFAALQYHIN------------KLSIMTSENHLNNSDKEVDEVD 358

  Fly   383 SALKELQITLEGPDYGGDSRNITRIPELSDYLRYLKPQRFTLRGYKRYYFTYRDLHLHLFKNAED 447
            :||.:|:|||||........:||.||||:||::..||::.||:|||:|:.|::|..:..:|:.|:
  Rat   359 AALSDLEITLEGGKTSTILGDITSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSREE 423

  Fly   448 SRRVAPAISINLKGCEVTPDVNLSQGKYAIRLEVSPDGGHGINSEVWVRCENEQQYAKWMAACRL 512
            :.. .||..:||:|||||||||:|..|:.|:|.:..  ..|:| |:|:||:||:|||.|||||||
  Rat   424 ASG-TPAHQMNLRGCEVTPDVNISGQKFNIKLLIPV--AEGMN-EIWLRCDNEKQYAHWMAACRL 484

  Fly   513 AAKGRSLADSSYESEVDSILSLLQMQRPAHGVHVNIDPR--------SVEAVDYLSPKIIRKLSN 569
            |:||:::|||||..||.:|||.|:||      |:|.||:        .:.....:||:.::|..|
  Rat   485 ASKGKTMADSSYNLEVQNILSFLKMQ------HLNPDPQLIPDQITTDINPECLVSPRYLKKYKN 543

  Fly   570 K----------------AVQRILEAHANVRELNALDSKLKYIQAWRSLPDFGVSLFIIKFDGHRK 618
            |                ...||||||.||.:::.:::|:::||||:|||:||::.||.:|.|.::
  Rat   544 KQEKGCKKQMPGYVRELITARILEAHQNVAQMSLIEAKMRFIQAWQSLPEFGITHFIARFQGGKR 608

  Fly   619 EELLGVAHNRIMRMDLSSGDHIKTWRYNTMKAWNVNWNIKCMMIQFEDE-NVVFSCHSADCKVVH 682
            |||:|:|:||::|||.|:||.|||||::.||.|||||.||.:.::|.|| .:.|.|...||||||
  Rat   609 EELIGIAYNRLIRMDASTGDAIKTWRFSNMKQWNVNWEIKMVTVEFADEVRLSFICTEVDCKVVH 673

  Fly   683 EFIGGYIFMSMRSKDTNQTLNEELFHKLTGGW 714
            ||||||||:|.|:||.|::|:||:|:|||.||
  Rat   674 EFIGGYIFLSTRAKDQNESLDEEMFYKLTSGW 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fit2NP_648947.1 B41 259..>351 CDD:214604 56/91 (62%)
FERM_M 310..>365 CDD:278785 30/54 (56%)
PH_fermitin 408..536 CDD:269943 65/127 (51%)
PH 408..515 CDD:278594 53/106 (50%)
FERM_M <557..609 CDD:278785 23/67 (34%)
FERM_C_fermitin 603..693 CDD:270026 52/90 (58%)
Fermt2XP_006251817.1 PH_fermitin 384..508 CDD:269943 65/127 (51%)
PH 392..487 CDD:278594 48/98 (49%)
FERM_M <520..599 CDD:278785 23/78 (29%)
PH-like 593..684 CDD:302622 52/90 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350296
Domainoid 1 1.000 290 1.000 Domainoid score I1485
eggNOG 1 0.900 - - E1_KOG3727
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4976
Inparanoid 1 1.050 625 1.000 Inparanoid score I826
OMA 1 1.010 - - QHG48345
OrthoDB 1 1.010 - - D132272at33208
OrthoFinder 1 1.000 - - FOG0001455
OrthoInspector 1 1.000 - - mtm9058
orthoMCL 1 0.900 - - OOG6_103097
Panther 1 1.100 - - O PTHR16160
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X911
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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