DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fit2 and Fermt3

DIOPT Version :10

Sequence 1:NP_648947.1 Gene:Fit2 / 39907 FlyBaseID:FBgn0036688 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_722490.1 Gene:Fermt3 / 108101 MGIID:2147790 Length:665 Species:Mus musculus


Alignment Length:736 Identity:295/736 - (40%)
Similarity:433/736 - (58%) Gaps:115/736 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ENSWNLRIFITD---LALEKTMRVRGDQHIGGIMLQLVDPENPK-DWSDHALWWPARNVWLSRTK 66
            ::||.||:|:.:   .|...|:||.|:.||||::|::|:..|.| ||||||:||..:..||.:|.
Mouse    13 DSSWELRVFVGEEDPEAQSVTLRVTGESHIGGVLLKIVEEINRKQDWSDHAIWWEQKRQWLLQTH 77

  Fly    67 LTLDQCGVQADSLLHFTPMHKILRVQLPDLRYLDSRVDYSVKTFSAVVNLCKQLDIRYPEELSLC 131
            .|||:.|:.||:.|.|.|.|:.:.::||:.|.|..|..:|...|..|..:|:.|.||:||||||.
Mouse    78 WTLDKYGILADARLFFGPQHRPVILRLPNRRVLRLRASFSKPLFQTVAAICRLLSIRHPEELSLL 142

  Fly   132 KPLEAEHLKRNFAQVPHQKRVPIAEPDGTTYLQPAADTNSFVPISTSFHGEGGSTGSLDKPSAPG 196
            :..|.:..|:       :::.|..|....|.:..|...     ..|.|.|               
Mouse   143 RAPEKKEKKK-------KEKEPEEEVHDLTKVVLAGGV-----APTLFRG--------------- 180

  Fly   197 SFFCAPLSPHNHRARSPVRTVSPFPGTWKQSQLGYATYDSSSSSLGDFQENLASSPPTPCADVRA 261
                                   .|..:..|....|.|...|.             |.|..|...
Mouse   181 -----------------------MPAHFSDSAQTEACYHMLSR-------------PQPAPDPLL 209

  Fly   262 LQL--RPKSLVEKARLNVGWLDSSLSIMEQGIREYDTLCLRFKYFTFFDLNPKCDQVRINQLYEQ 324
            ||.  ||.||.:|.:|:..|||||..:|:|||:..|.|.|||||::||||:||.|.||:.|||||
Mouse   210 LQRLPRPSSLPDKTQLHSRWLDSSRCLMQQGIKAGDVLWLRFKYYSFFDLDPKTDPVRLTQLYEQ 274

  Fly   325 AKWSVLNEELDCTEEESLMFAALQFQVNHHVDHTPQG--AAVDSGIETSSQENDNEDEIDSALKE 387
            |:|.:|.||:||||||.::|||||:.:|........|  |:.|.|:          |::|:||..
Mouse   275 ARWDLLTEEIDCTEEEMMVFAALQYHINKLTLSGDVGELASGDLGL----------DDLDAALNN 329

  Fly   388 LQITLEGPDYGGDSRNITRIPELSDYLRYLKPQRFTLRGYKRYYFTYRDLHLHLFKNAEDSRRVA 452
            |::.|:|........::|.||||.|:||..:|::.||:||::|:..::|..|..:| ::|.....
Mouse   330 LEVKLKGSAPSDMLDSLTTIPELKDHLRIFRPRKLTLKGYRQYWVVFKDTTLSYYK-SQDEAPGD 393

  Fly   453 PAISINLKGCEVTPDVNLSQGKYAIRLEV-SPDGGHGINSEVWVRCENEQQYAKWMAACRLAAKG 516
            |...:|||||||.||||:|..|:.|:|.| ||:|    .||:::||::|||||:||||||||:||
Mouse   394 PTQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEG----MSEIYLRCQDEQQYAQWMAACRLASKG 454

  Fly   517 RSLADSSYESEVDSILSLLQMQR-----------------PAHGVHVNIDPRSVEAVDYLSPKII 564
            |::|||||.|||.:||:.|.:||                 ||.|    ::|..:     ::|:..
Mouse   455 RTMADSSYASEVQAILAFLSLQRAGGSNGGSGNKPQGPEAPAEG----LNPYGL-----VAPRFQ 510

  Fly   565 RKLSNKAV-QRILEAHANVRELNALDSKLKYIQAWRSLPDFGVSLFIIKFDGHRKEELLGVAHNR 628
            ||...|.: .||||||.||.:|:..:::|::||||:||||||:|..:::|.|.||:|:||:|:||
Mouse   511 RKFKAKQLTPRILEAHQNVAQLSLTEAQLRFIQAWQSLPDFGISYVMVRFKGSRKDEILGIANNR 575

  Fly   629 IMRMDLSSGDHIKTWRYNTMKAWNVNWNIKCMMIQFEDE-NVVFSCHSADCKVVHEFIGGYIFMS 692
            ::|:||:.||.:||||::.|:.|||||:|:.:.|:|::. ||.|||.||.|::|||:||||||:|
Mouse   576 LIRIDLAVGDVVKTWRFSNMRQWNVNWDIRQVAIEFDEHINVAFSCVSASCRIVHEYIGGYIFLS 640

  Fly   693 MRSKDTNQTLNEELFHKLTGG 713
            .|.:...:.|:|:||.:||||
Mouse   641 TRERARGEELDEDLFLQLTGG 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fit2NP_648947.1 FERM_F0_kindlins 8..86 CDD:340615 38/81 (47%)
FERM_F1_kindlins 87..304 CDD:340616 58/218 (27%)
B41 259..>351 CDD:214604 54/93 (58%)
PH_fermitin 408..536 CDD:269943 66/128 (52%)
FERM_M <507..609 CDD:459788 52/119 (44%)
FERM_C_fermitin 603..693 CDD:270026 49/90 (54%)
Fermt3NP_722490.1 Ubl1_cv_Nsp3_N-like 15..97 CDD:475130 38/81 (47%)
FERM_F1_KIND3 98..254 CDD:340705 58/218 (27%)
B41 <221..>301 CDD:214604 48/79 (61%)
PH_fermitin 350..474 CDD:269943 66/128 (52%)
FERM_M <433..555 CDD:459788 59/130 (45%)
FERM_C_fermitin 550..641 CDD:270026 49/90 (54%)

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