DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fit2 and fermt1

DIOPT Version :9

Sequence 1:NP_648947.1 Gene:Fit2 / 39907 FlyBaseID:FBgn0036688 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_002939191.1 Gene:fermt1 / 100492800 XenbaseID:XB-GENE-5960335 Length:675 Species:Xenopus tropicalis


Alignment Length:730 Identity:314/730 - (43%)
Similarity:471/730 - (64%) Gaps:74/730 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIH---VGENSWNLRIFITDL----ALEKTMRVRGDQHIGGIMLQLVDPEN-PKDWSDHALWWPA 57
            |.|   ||..||.|.:.:.:.    ..:..:||.||.||||:||:||:..: .:||||:||||..
 Frog     1 MTHTAAVGPASWELCVKVEEQNGAEPQDVKIRVSGDLHIGGVMLRLVEKISVSRDWSDYALWWEQ 65

  Fly    58 RNVWLSRTKLTLDQCGVQADSLLHFTPMHKILRVQLPDLRYLDSRVDYSVKTFSAVVNLCKQLDI 122
            :|.||.:|..|||:.||||::.|.|||.||:||::||:::.:..:|.:|...|.|||.:||.|:|
 Frog    66 KNCWLLKTHWTLDKYGVQANAKLFFTPQHKLLRLRLPNMKLVRLKVSFSAVVFKAVVEICKILNI 130

  Fly   123 RYPEELSLCKPLEAEHLKRNFAQVPHQKRVPIAEPDGTTYLQPAADTNSFVPISTSFHGEGGSTG 187
            |.||||||.||.: :::|:       :|:    :.:..|.|....:..|  |.|.|        |
 Frog   131 RRPEELSLIKPSD-DYVKK-------KKK----KENKDTVLDEVINLES--PNSNS--------G 173

  Fly   188 SLDKPSAPGSFFCAPLSPHNHRARSPVRTVSPFPGTWKQSQLGYATYDSSSSSLGDFQEN-LASS 251
            ||   ::||.:         .:..:|:  ..|..||...:.:.:.|    .|.|.:...| ||:|
 Frog   174 SL---ASPGLY---------SKTMTPM--YDPVNGTPASATITWFT----DSPLAEQSCNILAAS 220

  Fly   252 PPTPCADVRALQLRPKSLVEKARLNVGWLDSSLSIMEQGIREYDTLCLRFKYFTFFDLNPKCDQV 316
            .|....::.|...:|::|::|.||:.||||||.|:||||.:|.|.|.|||||::|||||||.|.|
 Frog   221 QPNASLEILAQMYQPRTLIDKTRLSSGWLDSSRSLMEQGFQEDDHLLLRFKYYSFFDLNPKYDAV 285

  Fly   317 RINQLYEQAKWSVLNEELDCTEEESLMFAALQFQVNHHVDHTPQGAAVDSGIETSSQENDNEDEI 381
            |||||:|||:|::|.||:||||||.|||||||:.: |.|     ..:.|:...|:..|.   |||
 Frog   286 RINQLFEQARWALLLEEIDCTEEEMLMFAALQYHI-HKV-----SLSADAFESTTDGET---DEI 341

  Fly   382 DSALKELQITLEGPDYGGDSRNITRIPELSDYLRYLKPQRFTLRGYKRYYFTYRDLHLHLFKNAE 446
            ::||..|::.|||........:||.||:|:|.|:..:|::.||:..|:|:|.::|..:..|||.|
 Frog   342 EAALSNLEVALEGGKTDRLLEDITDIPKLADNLKLFRPKKLTLKASKQYWFVFKDTSISYFKNKE 406

  Fly   447 DSRRVAPAISINLKGCEVTPDVNLSQGKYAIRLEVSPDGGHGINSEVWVRCENEQQYAKWMAACR 511
             :....|...:||:|||:.||||::|.|:.|:|.:  ....|:| |||::|:||.|||||||||.
 Frog   407 -AAHGEPVEKLNLRGCEIVPDVNVAQKKFGIKLLI--PFAEGMN-EVWLKCDNESQYAKWMAACV 467

  Fly   512 LAAKGRSLADSSYESEVDSILSLLQMQRPAHGVHVNIDPRSVEAVD-----YLSPKIIRKLSNKA 571
            ||:||:::|||||..||.:|||.|:::.......|   |.::|.||     ::||:..:|..:|.
 Frog   468 LASKGKTMADSSYRPEVHNILSFLKLKNTNTTSQV---PSNIENVDIKPECFVSPRYSKKYKSKQ 529

  Fly   572 V-QRILEAHANVRELNALDSKLKYIQAWRSLPDFGVSLFIIKFDGHRKEELLGVAHNRIMRMDLS 635
            : .|||||..|:.:::.:::||::||||:|||:||::.:|::|.|.:|::||||:|||::|:|::
 Frog   530 LAARILEAQQNIAQMSLVEAKLRFIQAWQSLPEFGLAYYIVRFRGSKKDDLLGVSHNRLIRIDIA 594

  Fly   636 SGDHIKTWRYNTMKAWNVNWNIKCMMIQFEDEN--VVFSCHSADCKVVHEFIGGYIFMSMRSKDT 698
            :.|.:.|||:..||.|||||..:.:.|:| |:|  :.|:..||:||:|||:||||||:|.||||.
 Frog   595 TKDPVTTWRFANMKQWNVNWEKREVAIEF-DQNIAIAFTSQSANCKIVHEYIGGYIFLSTRSKDQ 658

  Fly   699 NQTLNEELFHKLTGG 713
            |:||:|:||||||||
 Frog   659 NETLDEDLFHKLTGG 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fit2NP_648947.1 B41 259..>351 CDD:214604 59/91 (65%)
FERM_M 310..>365 CDD:278785 32/54 (59%)
PH_fermitin 408..536 CDD:269943 60/127 (47%)
PH 408..515 CDD:278594 48/106 (45%)
FERM_M <557..609 CDD:278785 22/57 (39%)
FERM_C_fermitin 603..693 CDD:270026 44/91 (48%)
fermt1XP_002939191.1 FERM_F0_KIND1 11..94 CDD:340700 38/82 (46%)
Ubiquitin_like_fold 95..273 CDD:391949 73/217 (34%)
B41 <238..>321 CDD:214604 57/83 (69%)
PH_fermitin 368..492 CDD:269943 60/127 (47%)
FERM_M <510..568 CDD:366056 22/57 (39%)
FERM_C_fermitin 562..653 CDD:270026 44/91 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 296 1.000 Domainoid score I1456
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 633 1.000 Inparanoid score I827
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132272at33208
OrthoFinder 1 1.000 - - FOG0001455
OrthoInspector 1 1.000 - - mtm9477
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X911
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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