DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6652 and Lca5

DIOPT Version :9

Sequence 1:NP_648946.3 Gene:CG6652 / 39905 FlyBaseID:FBgn0036687 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_081724.1 Gene:Lca5 / 75782 MGIID:1923032 Length:704 Species:Mus musculus


Alignment Length:681 Identity:140/681 - (20%)
Similarity:266/681 - (39%) Gaps:152/681 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ASSYGPRVSQSEPNNLMAASAKSCESLFSASSRE-------SASLIY----QRSKPPPPQQRGGV 61
            :|.:|.....|.|::  ..:...|     ||:||       |.:.::    ::..|.....:.|:
Mouse    25 SSDFGSSPQSSGPSS--PVNTTPC-----ASTREKNPKRHLSDNQVHHPTVRKVSPKAVPSKKGI 82

  Fly    62 KGSGSMSSQNHSEIH-------QRVMSARNLRAKTFQNQLADAQAEIANLAHENRMLRTLHNRQS 119
            :......|.|...:.       :||:|||.|:....||::::.|.::|.|..||:.|::|..||.
Mouse    83 RVGFRSQSLNREPLRKDPDIVTKRVLSARLLKINELQNEVSELQVKLAQLLKENKALKSLQYRQE 147

  Fly   120 SALNKYEAHNAELPKLLSSHAEELRMWQTKYRKLQAANKALELKLKQKEEIILTLSDQNKHYSQL 184
            .||||:|....|:.:|:..|..|:...:.:.||.|...:|.|.::|:.|..:.......:...::
Mouse   148 KALNKFEDAENEISQLIHRHNNEITALKERLRKSQEKERATEKRVKETEGELFRTKFSLQKLKKI 212

  Fly   185 NKDKNLDERQKLQEKLKSLEQRLEEKDNDMKLMARKVQLESKNIRQQLLNEQRKGKEV-----ML 244
            ::.::|.||..|.:||.|.|.:|::.:..:|.:::.::|.:.:.::|||.|:::..|.     :|
Mouse   213 SEARHLPERDDLAKKLVSAELKLDDTERKIKELSKNLELSTNSFQRQLLAERKRAFEAYDENKVL 277

  Fly   245 KLEKAKLEISGYRKLEEYTLGTDKVN------PLSSGRRTK---LSGVTDEPDKIDKLEKSM--- 297
            :.|..:|    :.||:|.....|..|      |.||.::.|   ...|:.:.|..|:..|.:   
Mouse   278 QKELQRL----HHKLKEKEKELDIKNIYANRLPKSSPKKEKEIERKHVSCQSDFTDQCTKGVQTA 338

  Fly   298 -------------------------EMLDKAIEKN--NQSEFTALTDVMESESFYDFEKDSAEDK 335
                                     |.|...:|..  |:.....|:.|:..|..||.::|....|
Mouse   339 EDFELEDFPFTAQTVLCYENRWDEPEYLSSYLEYQDLNKHGSEMLSSVLGQEGKYDEDEDPCSAK 403

  Fly   336 SGPNTPPSQIERQ----------VGGRGGKLILP----PATNHA-----KMGQKANRSTLSQVLS 381
            .....|.|:..|:          :.||..||.|.    |..|:.     |...:|.|.....:|:
Mouse   404 QEARKPESEWAREELDKVKGKSALLGRAEKLALEAGRFPTENYQAQSVDKFEDEAERLKTEMLLA 468

  Fly   382 AQGKISVSSGKSAKSRIAVAVPKMESVQVSKRREPETVSR-----LASAETK---PKQKPLEYEY 438
            ...:|:                       .:.::|:.:.|     |.:.|:|   |.:....|.:
Mouse   469 KLNEIN-----------------------KELQDPQNLGRAPLPLLPNFESKLHSPDRSTRPYSF 510

  Fly   439 EDDYEPA--GEDGDDDAYGMMSKMCEGEEP-------QDNSEENANESSLLKYSAYMDNKSSEGD 494
            .:..:.:  |:...|.::  ::...||..|       |..|....:|.|...|.........:.:
Mouse   511 PESLDRSFNGQHLQDLSF--LTPRGEGGSPGPIRSPGQIRSPAPLDEFSFGSYVPSFGKTLGKSN 573

  Fly   495 PLEESMEEYD-GTDGQQSQGSDDEDISVRAPRLKENMSSLRKQISNDFKERESFLKTFCRQASNS 558
            |..:.....| .::..:|...|..|:..|    ||..::|.:|:             |...|||:
Mouse   574 PPSQKSSLLDFQSNSSESPSKDSLDLMSR----KEKKATLMEQL-------------FGPSASNT 621

  Fly   559 NMRDDSASKKRNSIATGAAASSHMTGSRKNA 589
            ::...|......:.:.|.....|.....:|:
Mouse   622 SVSSKSTDPHFPAASRGDMDPLHFLSGDRNS 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6652NP_648946.3 Lebercilin 82..257 CDD:292252 49/179 (27%)
GBP_C <151..252 CDD:303769 25/105 (24%)
coiled coil 239..250 CDD:293879 3/15 (20%)
Lca5NP_081724.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..80 11/61 (18%)
Lebercilin 110..295 CDD:406132 52/188 (28%)
SMC_prok_B <114..478 CDD:274008 85/390 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..417 8/27 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..661 35/196 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849740
Domainoid 1 1.000 96 1.000 Domainoid score I7311
eggNOG 1 0.900 - - E1_28I5W
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004975
OrthoInspector 1 1.000 - - otm42865
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR16650
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5200
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.830

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