DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3764 and Fnip1

DIOPT Version :9

Sequence 1:NP_001261977.1 Gene:CG3764 / 39902 FlyBaseID:FBgn0036684 Length:1469 Species:Drosophila melanogaster
Sequence 2:NP_001258092.2 Gene:Fnip1 / 100362347 RGDID:2318339 Length:1165 Species:Rattus norvegicus


Alignment Length:1470 Identity:321/1470 - (21%)
Similarity:551/1470 - (37%) Gaps:448/1470 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 FEGSQVRVLLYKEDDT--RRLLFDSNALQKVMHKDQSATSASISSTSTSGGGKFLK----NEKYT 155
            |:.||:|:::|::.:.  |.:||||:..:|   .:.::.|...:.......||..:    .:..:
  Rat    37 FDPSQIRLIVYQDCERRGRNVLFDSSVKRK---NEDTSVSKLCNDAQVKVFGKCCQLKPGGDSSS 98

  Fly   156 SLQNGKIPSKSHSSNGSNFIEVCAEYGYKHNRPSGADITPVGEMVFGSLPMSFCGTALKVHWLPE 220
            ||.:    |.:.||:|.   :.|.:  |:.:|.| :|...:|||:|||:.||:.|:.||:|.:..
  Rat    99 SLDS----SITLSSDGK---DQCPK--YQGSRCS-SDANMLGEMMFGSVAMSYKGSTLKIHQIRS 153

  Fly   221 PSRILCSQVYLTPTSNG--GSGHSPYSTL-----STNSLATPRTSICSEHGSMDGLSMNSFSMPF 278
            |.:::.|:|:...|.:.  ||.::...:|     .:|:|....:::.  :|.:..:.::.|..| 
  Rat   154 PPQLMLSKVFTARTGSSICGSLNTLQDSLEFINQDSNTLKADSSTVI--NGLLGNIGLSQFCSP- 215

  Fly   279 SVSVGRQMSLTPPLDVPATPADQQSLSIHS--IDSSGPRYSSTYSTATDSGYSASGSGSAAGGDQ 341
                .|..|...||.:..:.:   ..::||  :|..|...|..    .|||.:.|          
  Rat   216 ----RRAFSEQGPLRLIRSAS---FFAVHSNPMDMPGRELSED----RDSGIARS---------- 259

  Fly   342 WSYQYSSTRSSLGSVL-----SDQSDAMRKLSMDLACYTGSPYLDGFASDGCLQRRISRNLRTSF 401
                     :||.|:|     |..|      |:..:|  .|.|          |||..|:..||.
  Rat   260 ---------ASLSSLLITPFPSPNS------SLTRSC--ASSY----------QRRWRRSQTTSL 297

  Fly   402 ENEHSKNDFIGFLSDNYALNGPVVAPAGGGAGGGSEGGGMAPPQYRRASYCANETRSNPEMGRRQ 466
            ||                                    |:.|......|:..::....|..|   
  Rat   298 EN------------------------------------GVFPRWSIEESFNLSDESCGPNPG--- 323

  Fly   467 ANLRRRAKLGLAVCISMSESFEEEMEL--FCSEHIALLESMLSRLRASTE--------------- 514
              :.|:.|:.:.|..|:|:..:|..:.  |...|..|.||.:::|:::.|               
  Rat   324 --IVRKKKIAIGVIFSLSKDEDENNKFNEFFFSHFPLFESHMNKLKSAIEQAMKMSRRSADAGQR 386

  Fly   515 -LAYINHKNFLQIMFQAWQDTQQWFSDLFTAPRIKTPVWLSITTSGSKYSKTVAERFIKELCDLL 578
             |||       ..:..|..:.:....:|:|.|||..||||:: .||:.....:..||:||...|:
  Rat   387 SLAY-------NRIVDALTEFRTTICNLYTMPRIGEPVWLTM-MSGTPEKNQLCHRFMKEFTFLM 443

  Fly   579 SFADTKDSNFFISTMLTGILTHHLGWVATVSAFNSSGSK---RSESSASAAAIEQRAKLLQVAQK 640
               :....|.|:..::|.:||:||.||.||........|   ...||.|..         .:|:.
  Rat   444 ---ENASKNQFLPALITAVLTNHLAWVPTVMPNGQPPIKIFLEKHSSQSVG---------MLAKT 496

  Fly   641 HPYNALWAQLGDLYGAIGMPPKLARTIVCGAEKLWVEKLLNVLTYFIRCSEVRRAAKREDFNKQL 705
            ||||.|||||||||||||.|.:||||:|.|..:..|::||..|||||||||:             
  Rat   497 HPYNPLWAQLGDLYGAIGSPVRLARTVVVGKRQDLVQRLLYFLTYFIRCSEL------------- 548

  Fly   706 INDLAAQSQTKNQTGTQERHKSPPTQKRGLSRAATCKQNLNAIADDADDENGELNMYDRDNEDGD 770
                            ||.|..                           ||||           |
  Rat   549 ----------------QETHLL---------------------------ENGE-----------D 559

  Fly   771 PDGLDSGSLDASDGMQTLKKNEIPTVLAFRDSHFVQQELRIGNYLMDTGIDKKMLLARQAQQYFR 835
            ...:..|::..:    ||:|.|:      .:|.:|         |:....:|..||.:::::   
  Rat   560 EAIVMPGTVITT----TLEKGEV------EESEYV---------LITVHRNKSSLLFKESEE--- 602

  Fly   836 TGKDGRIRLTVTTPDNVELCMEEEQSSGTGSVS---TGSVDDGAIEAIDYEDNVEAPPKKNFFWN 897
                     |.|:..|.:.|........|.:||   ...:.|.:.|.:...|..:          
  Rat   603 ---------TGTSNCNCKYCSHPLLGQNTENVSQLEREDIQDNSKELLGISDECQ---------- 648

  Fly   898 MVPVAGVKEGLSLSDLAKLQQGIRIINRKLERRSSSYSVEGNPDQQQSKTGETGVGDFEPLSHER 962
            .:|....:|. :.:|:.:.:..:|   .:|:.:..:....|:....:....|||:   ||.....
  Rat   649 KIPPPDCQEE-NATDVQRYRDKLR---ARLDTKLETIVCTGSAPADKCVLSETGL---EPTEESW 706

  Fly   963 RASHLSLSDLITQNSMGKSDRMTWGIEPIKENVSLEEQIHFDHCHKLIEREHGICRQTSADNGNG 1027
            ::..|..||    |..|.:.|.| ||...|:.........|.            |..|...    
  Rat   707 QSKELLDSD----NQTGTAMRPT-GIVVEKKPPDKTVPSAFS------------CELTQTK---- 750

  Fly  1028 VVFVLGDNEPLINLKKSSEDLSGDQDSK-PTLMLCAQHQRTHDRSKHSGMKFNFEQYPQIATNYM 1091
            |.|::||:            :|.|.|:: .:..:..|..|.|.:.        .::...:...:.
  Rat   751 VTFLIGDS------------MSPDSDTELRSQAVVDQINRHHSKP--------LKEDRGVTEKHQ 795

  Fly  1092 KNKNLLMSNYDLLMDKVTKLEASEAAALKGSDSTATLAASSSSTAALLPPTTPVTANSDRCVVCS 1156
            :|             |:||.::       |...|..:.:..|..   ||              | 
  Rat   796 EN-------------KITKDQS-------GGSGTHNMVSGESCE---LP--------------C- 822

  Fly  1157 SGVGINTSATWNQTPSNATELEFETDEMHCYNQSGNGNGFSSKALQSVNSAASIDTLKSSVAVEP 1221
                      |:.:         :.:.|..:::..|.:...::.:..|....|.|:.:....:|.
  Rat   823 ----------WSHS---------DPESMSLFDEYFNDDSIETRTIDDVPVKTSTDSKEYCCMLEY 868

  Fly  1222 P--------------------------TPTIPTQMQTTYM--------RKQQPKR--------VP 1244
            |                          ....|.|.|...:        ::...|:        :|
  Rat   869 PKRLYTKDNKQQNELCKCIETVHQDSCNACFPQQDQRDALSILVPHGDKESSDKKIAVGTEWDIP 933

  Fly  1245 SGRSSVSSVA---AKCAAVNVSQQL--------------LKLPVPGIKELPQDDESPGDQLRAGF 1292
            ...||.|::.   ::....::.:|:              .::|.||.|.:......|.   .|.|
  Rat   934 RNESSDSALGDSESEDTGPDIRRQVGSYCGGDQEDWAEEDEIPFPGSKLIEVSAVQPN---IANF 995

  Fly  1293 IPSLLLSVSDHYVSDMVLQGTCAPPNKWEMHLREDLALAARSASLISQPAENIAIVADMDKWDVR 1357
            ..|||......||.|.|||| .....:....|..||:.|.:...|....||.:.|:||||||.|:
  Rat   996 GRSLLGGYCSSYVPDFVLQG-IGSDERLRQCLASDLSHAVQHPVLDEPIAEAVCIIADMDKWTVQ 1059

  Fly  1358 LISSQTQQFPYAGGQSSPVGMSQLVSSMLETVQAMNAGGIPAYECLSFLESKLQEIYLQSETLAA 1422
            :.|||.:......|:.  |.:|.|||::|.:...:....:....|:..||.:|||:|.:|:.||.
  Rat  1060 VASSQRRVTDNKLGKE--VLVSSLVSNLLHSTLQLYKHNLSPNFCVMHLEDRLQELYFKSKMLAE 1122

  Fly  1423 FLLETDPCRLSDITNPLQLSENDVPLLLSIAYIHTPKISR 1462
            :|.......:.::...|.:..:|:|||.::|..|:|.:::
  Rat  1123 YLRGQMRVHVKELGVVLGIESSDLPLLAAVASTHSPYVAQ 1162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3764NP_001261977.1 FNIP_N 101..222 CDD:291310 35/126 (28%)
FNIP_M 461..692 CDD:291311 85/251 (34%)
FNIP_C 1269..1460 CDD:291312 61/190 (32%)
Fnip1NP_001258092.2 FNIP_N 41..155 CDD:405340 35/126 (28%)
FNIP_M 316..548 CDD:405341 86/256 (34%)
FNIP_C 975..1161 CDD:405342 61/191 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 138 1.000 Domainoid score I4719
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 286 1.000 Inparanoid score I2763
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D156423at33208
OrthoFinder 1 1.000 - - FOG0002940
OrthoInspector 1 1.000 - - otm44486
orthoMCL 1 0.900 - - OOG6_104859
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2303
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.960

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