DRSC/TRiP Functional Genomics Resources

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Protein Alignment Exn and Arhgef3

DIOPT Version :9

Sequence 1:NP_001097630.2 Gene:Exn / 39900 FlyBaseID:FBgn0261547 Length:2029 Species:Drosophila melanogaster
Sequence 2:NP_001276615.1 Gene:Arhgef3 / 71704 MGIID:1918954 Length:551 Species:Mus musculus


Alignment Length:559 Identity:115/559 - (20%)
Similarity:213/559 - (38%) Gaps:169/559 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1482 SEPHSLFSN---EPLYQMYSAAK---------LESITRDLEAHGSSDGYEEIGLQAKAKPEPLVK 1534
            |||    ||   :||.::.|.|.         |:..::.|:        ..|..:::::|: ::.
Mouse    58 SEP----SNKRVKPLSRVTSLANLIPPVKTTPLKRFSQTLQ--------RSISFRSESRPD-ILA 109

  Fly  1535 PRPTALQLVEPKNGPSRT-------LWSEIPEVIHSCILPTLTSRERSLQEAKFEIITSEASYLK 1592
            ||..:      :|..|.:       ||||..:|   |:...||::|...|||.||:...|...::
Mouse   110 PRAWS------RNATSSSTKRRDSKLWSETFDV---CVNQVLTAKEIKRQEAIFELSQGEEDLIE 165

  Fly  1593 SLNLLRRHFMNHNAFLDSSVLSAKDRKALF---SYIVPVHECSERLLTELEACWQDN-------I 1647
            .|.|.::.:  |:..|..|:::.::...:|   ..::|:|   |.||::|....:.:       .
Mouse   166 DLKLAKKAY--HDPMLKLSIMTEQELNQIFGTLDSLIPLH---EELLSQLRDVRKPDGSTEHVGP 225

  Fly  1648 MLLGLSRCIYEIAERHFHVYVAFCEHQGRMDRTLRRLKESKESLAFQQHLERLEASPSCCGLNLH 1712
            :|:|...|:..        |.::|.:|......   |...|:....|..|:|...||....|:|.
Mouse   226 ILVGWLPCLSS--------YDSYCSNQVAAKAL---LDHKKQDHRVQDFLQRCLESPFSRKLDLW 279

  Fly  1713 SFLMLPMQRITRLPLLIDAVFSKESPLNREEYESWKLTLALVQKVVGQCNEAANRWEQAFELERI 1777
            :||.:|..|:.:.|||:..:. :.:|.:..:.:..:..:.::|.:|.:.|......|..:..||:
Mouse   280 NFLDIPRSRLVKYPLLLREIL-RHTPNDNPDQQHLEEAINIIQGIVAEINTKTGESECRYYKERL 343

  Fly  1778 ARQLEFPSHVRALAIAPVGVPRAGAK------PRFLVKRGELTHLLWRGEDAKLTFGKRLTKISI 1836
            ....|                  |.|      .|.|...|||               |....:.:
Mouse   344 LYLEE------------------GQKDSLIDSSRVLCCHGEL---------------KNNRGVKL 375

  Fly  1837 YAFLFSDLLLLCK---RRGESCFSVF-DYCPRSMLTLAAGDSLPQLPTKDLKD------------ 1885
            :.|||.::|::.:   ...:.|:.:: ...|...|||           :||:|            
Mouse   376 HVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTL-----------EDLQDGEVRLGGSLRGA 429

  Fly  1886 ----QAGKNLILMTLLE---------------------NCDRKTVELVLSC---PSVSDQQRWLQ 1922
                :..||...::...                     ||.|:..|.|||.   ..:.|.:..:|
Mouse   430 FSNNERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLSAAGQAGLLDSEGLVQ 494

  Fly  1923 A----MRPPEAETPGEKLYES---WDCPQVVAKHSYESD 1954
            .    .|.|:.||..|::.:|   .||....::.|.|.:
Mouse   495 GPGTENREPQGETKLEQMDQSDSESDCSMDTSEVSLECE 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ExnNP_001097630.2 RhoGEF 1581..1763 CDD:279015 40/191 (21%)
PH_ephexin 1805..1931 CDD:269929 31/173 (18%)
SH3_ephexin1_like 1944..1998 CDD:212727 2/11 (18%)
Arhgef3NP_001276615.1 RhoGEF 152..328 CDD:366202 41/192 (21%)
PH_RhoGEF3_XPLN 342..474 CDD:269976 27/175 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3601
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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