DRSC/TRiP Functional Genomics Resources

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Protein Alignment Exn and arhgef11

DIOPT Version :9

Sequence 1:NP_001097630.2 Gene:Exn / 39900 FlyBaseID:FBgn0261547 Length:2029 Species:Drosophila melanogaster
Sequence 2:NP_001027010.1 Gene:arhgef11 / 565268 ZFINID:ZDB-GENE-070604-1 Length:1417 Species:Danio rerio


Alignment Length:1088 Identity:228/1088 - (20%)
Similarity:359/1088 - (32%) Gaps:316/1088 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1111 KRHSTQLVR--------------QSQDGNRSGGVRSSHRRSKNHSASAHTLGEHVVISDDYDSFE 1161
            ::|:|:::|              :.|..|.|..:.....|:|..::..     .|.|..|.|...
Zfish   182 QKHATEILRKMLEQEEAELQNLLEEQSRNPSVSLEERIERAKRRASQV-----RVKIQQDVDGTR 241

  Fly  1162 TD-------------SDDHGDGEPDLRQRNYNDSGVDMRN---HRLPKP-------------PPP 1197
            :|             |.|..:|:.::.:..::.....:||   ||....             |..
Zfish   242 SDAVANYLTAGEGRLSIDSSEGDVEVCESPFSSPSSFLRNPLIHRQTSDTHTSDSGKMQIIGPEE 306

  Fly  1198 QNQ-----VYEFVRKFKDFISSKKSPKGSQQKLYEN-------TPASTLFYVE------------ 1238
            :.:     :.|....|:|....|..|  :...::..       .|...|||:.            
Zfish   307 EEEDDGYTINEMDGPFQDIELLKSRP--AHMTVFMRYVFGQLLDPNPLLFYLSVEAYLGSSPKDA 369

  Fly  1239 -------CS-----------KRTEDVYENTDFGPERIPAPE-TKGPVHQEQAPVLRAKQKNGKSL 1284
                   ||           |..|:...:.:   .|:.|.| .:||:.:.|..||...|...:..
Zfish   370 RSLAPQICSHFLDHDAPLKIKVREEFLTDIE---NRLHAQEDIRGPLSELQQQVLPDIQDQLQDY 431

  Fly  1285 RSRLRKSLVGSSFDTKQLSSL--APTRSTFYVEDPEGSLPALPLEPEIHGSGELDSG-------- 1339
            |::....| ||.|....|..|  .|.:....|:....:|..:..:.|...|..|.|.        
Zfish   432 RNKQTMGL-GSLFGESDLQQLDGDPVKEKQVVDKQIVALWEILSKHEEDRSSPLASAVHLYLRHS 495

  Fly  1340 ---FSDKNCTP--LPETPKFSTVARKAKKEAKANRRRTTIGLRPNDPPPP------PPPMTGNKS 1393
               ..|....|  :.|..|:.....||||.:.|.|.|.....:.|    |      .|..|...:
Zfish   496 GIKLRDSKVFPGLMSEKEKWLPFFPKAKKLSSAKRERDGEDKKRN----PILKYIGKPRSTSQST 556

  Fly  1394 ---PLDPERELDAEQTTSWYAECGVFKQATNGAVSPRGDEPVTPTPSGHGGVSSWYAESGLYQTS 1455
               ||.|.........       .:.:|..:.:.|....|......||..|..|  .||   .|.
Zfish   557 FHVPLSPTEVRPGSVR-------NIIQQFESNSDSLEDGELEGQRLSGSFGEDS--MES---PTI 609

  Fly  1456 GISVASSSGSSGVSTGNEAGLGDELSSEPHSLFSNE-------------PLYQMYSAAKLESITR 1507
            .:.:|.|........|...|.|......|.|....:             ||:...|::...|..|
Zfish   610 SVRLARSESLKAQGEGRRRGGGTGAEFVPRSRSDVDMEDCEEREGPGLRPLHHSASSSASSSSAR 674

  Fly  1508 DLEAHGSSDGYEEIGLQAKAKPEPLVKPR--------PTAL---------QLVEPKNGPSRTLWS 1555
            .||                 .|.|...||        |.:|         .:::..|      |.
Zfish   675 SLE-----------------NPTPPYTPRSQRRIVEVPVSLLPDAPALDEDVIDSHN------WQ 716

  Fly  1556 EIPEVIHSCILPTLTSRERSLQEAKFEIITSEASYLKSLNLLRRHFMNHNAFLDSSVLSAKDRKA 1620
               :.:...||.:|||||...|...:|:.|:|.|:|::|.:|.:.|....    .||||.::...
Zfish   717 ---DTVEPHILASLTSREIDRQAVIYELFTTEVSHLRTLRVLDQVFYQKM----QSVLSPEELSC 774

  Fly  1621 LFSYIVPVHECSERLLTELEACWQDNIMLLG-----LSRCIYEIAERHFHVYVAFCEHQGRMDRT 1680
            :|..:..|:|....|...::.| ::::::.|     |:|...|..::........|..|......
Zfish   775 IFLNLRQVYELHASLCESMKKC-RESVIVQGIGDIMLARFEGEAGDQFEEQVSHLCSQQSPALEL 838

  Fly  1681 LRRLKESKESLAFQQHLERLEASPSCCGLNLHSFLMLPMQRITRLPLLIDAVF------SKESPL 1739
            ::. |:.|:. .|...::..||||.|..|.|...|:..|||:|:.|||:|.:.      |.:.||
Zfish   839 IKN-KQRKDP-RFAHLIQECEASPHCRRLQLKDLLVSEMQRLTKYPLLLDNIIKYTETSSPDLPL 901

  Fly  1740 NREEYESWKLTLALVQKVVGQCNEAANRWEQAFELERIARQLEFPSHVRALAIAPVGVPRAG--- 1801
            .|.       ..|..:.::.:.||.....|....|.:..|:|:      |..:..:..|.|.   
Zfish   902 LRR-------AQACCRGILQEVNEDVRETEHRHLLSQYQRRLD------ATPLERLANPVAAQFR 953

  Fly  1802 ---AKPRFLVKRGELTHLLWR-GEDAKLTFGKRLTKISIYAFLFSDLLLLCKR----------RG 1852
               ...:.:|..|.||   || |:|         ..|.|.|.|.||||||.:|          ..
Zfish   954 NLDLTTKRMVHEGPLT---WRVGKD---------KAIEIQALLLSDLLLLLQRGPDDRLILRCPS 1006

  Fly  1853 ESCFSVFD----YCP----RSMLTLAAGDSLPQLPTKDLKDQAGKNLILMTLLE-NCDRKTVELV 1908
            .|...|.|    :||    .|.|..........|......::....|:..|||| |..:..:|..
Zfish  1007 RSLGGVTDLKTPFCPVVCLDSCLVRPVATDNKALYVISTSERQIYELVAGTLLEKNTWKDQLEKT 1071

  Fly  1909 LSC--------PSV-------------SDQQRWLQAMRPPEAE---------TPGEKLYESWDCP 1943
            :|.        |:.             :||....::...|:.|         ||.:...|   ||
Zfish  1072 ISAAAQGGSTKPNTPRFRSPGAGVRLSADQSEGSESRMYPDREDEMVLSPVVTPADAAEE---CP 1133

  Fly  1944 QVVAKHSYESDEPD--------VLQLELGDVVN----VSRKLPDGWYQ 1979
                     .::||        |.:..|.||..    :.|.|.|||.|
Zfish  1134 ---------DEDPDPGQKNKAGVAESALQDVETLRQLIFRDLEDGWSQ 1172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ExnNP_001097630.2 RhoGEF 1581..1763 CDD:279015 47/192 (24%)
PH_ephexin 1805..1931 CDD:269929 40/175 (23%)
SH3_ephexin1_like 1944..1998 CDD:212727 12/48 (25%)
arhgef11NP_001027010.1 PDZ_signaling 49..123 CDD:238492
DegQ <71..140 CDD:223343
RGS_PDZRhoGEF 300..446 CDD:188707 28/151 (19%)
RhoGEF 737..918 CDD:279015 47/194 (24%)
PH-like 935..1075 CDD:302622 39/157 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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