DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Exn and fgd1

DIOPT Version :9

Sequence 1:NP_001097630.2 Gene:Exn / 39900 FlyBaseID:FBgn0261547 Length:2029 Species:Drosophila melanogaster
Sequence 2:XP_688794.4 Gene:fgd1 / 560305 ZFINID:ZDB-GENE-081104-33 Length:995 Species:Danio rerio


Alignment Length:821 Identity:174/821 - (21%)
Similarity:285/821 - (34%) Gaps:281/821 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1257 IPAPETKGPVHQEQAPVLRAKQKNGKSLRSRLRKSLVGSSFDTKQLSSLAPTRSTFYVEDPEG-- 1319
            :|:|:          |.||....:..|.| .|.|||           ||.|.......|.|:.  
Zfish    39 LPSPQ----------PALRRTGSSSSSPR-LLTKSL-----------SLDPGPCLGAHETPQRLC 81

  Fly  1320 SLPALPLEPEIHGSGELDSGFSD------KNCTPLPETPKFSTVARKAKKEAKANRRRTTIGLRP 1378
            |.|. ||||: |.:|..::|..|      |...||| .|| ..|..|.....:.|.||.    ||
Zfish    82 SDPG-PLEPQ-HCNGTSENGPQDVPPPPPKTRPPLP-GPK-PQVPPKPPHLQQQNARRP----RP 138

  Fly  1379 NDPP-PPPPPMTGNKSPLDPEREL----DAEQTTSWYAEC---------------------GVF- 1416
            .|.| |||||  ....|.||.:..    .||.::|  ..|                     ||. 
Zfish   139 PDKPLPPPPP--SRPLPADPRQSRATMPRAEGSSS--PTCVLSLIEKFEREQIIVVPDITGGVMC 199

  Fly  1417 ------KQATNGAVSPRGDEPVTPTPSGHGGVSSWYAESGLYQ---------------------- 1453
                  :|||.|::||:..|.:.|..|....:.:..||..|.:                      
Zfish   200 TPRVPDQQATPGSLSPQTSEFILPCTSLQEPLEAPLAEDELEKEEKEEEEEEDVDETEEDDSELG 264

  Fly  1454 ----TSGISVASSSGSS-----------------------------GVSTGNEAGLGDELSSEPH 1485
                ...:|:.|..|:|                             |.....::|: |.:||..|
Zfish   265 ASCSDKRLSMESGYGASDKLLDNMEMTANQSEIPSDRLSLPPAQMDGKLANRDSGI-DSISSPSH 328

  Fly  1486 SLFSNEPLYQMYSAAKL------------------------------ESITRDLEAHGSSDGYEE 1520
            |    |.|..:....::                              |...||.|  |.||..|.
Zfish   329 S----EELCFVGDEDRVGHEREICPCSPGPGISCSYVEGPDEEGAGGEEAGRDSE--GDSDLEEG 387

  Fly  1521 IGLQAKAKPEPLVKPRPTALQLVEPKNGPSRTLWSEIPEVIHSCILPTLTSRERSLQEAKF---- 1581
            .|.:::..|..| :|.|.|    |.::                       |.|.|:|:..|    
Zfish   388 SGDESEMNPMAL-QPLPKA----ERQD-----------------------STEMSVQQRVFNIAN 424

  Fly  1582 EIITSEASYLKSLNLLRRHFMNHNAFLDSSVLSAKDRKA--------LFSYIVPVHECSERLLTE 1638
            |::.:|.:|:..|:||      ...|....:..|:.|.:        :||.|..::         
Zfish   425 ELLHTEKAYVSRLHLL------DQVFCAQLMEEARARSSFPCEMVMGIFSNICSIY--------- 474

  Fly  1639 LEACWQDNIMLLGLSRCIYE---------IAERHFHVYVAFCEHQGRMDRTLRRLKE-SKESLAF 1693
               |:....:|..|.:.:.|         |.::.......:.|:....||.:..:.. .:.|..|
Zfish   475 ---CFHQQFLLPALEKRMEEWDLNPRIGDILQKLAPFLKMYGEYVKNFDRAMELVNTWMQRSSQF 536

  Fly  1694 QQHLERLEASPSCCGLNLHSFLMLPMQRITRLPLLIDAVFSKESPLNREEYESWKLTLALVQKVV 1758
            :..:..::....|..|.|...::.|:|||.|..||:.. :....|.:.::::..:.:|.|:....
Zfish   537 KTIIHNIQKEEMCGNLTLQHHMLEPVQRIPRYELLLKD-YLHRLPEDADDFKDAQKSLELIATAA 600

  Fly  1759 GQCNEAANRWEQAFELERIARQLEFPSHVRALAIAPVGVPRAGAKPRFLVKRGELTHLLWRGEDA 1823
            ...|.|..:.|:..:|.::...|.....:    :.|...         |:|.|   |:|      
Zfish   601 EHSNAAIRKMERMRKLLKVYELLGGEEDI----VNPTNE---------LIKEG---HIL------ 643

  Fly  1824 KLTFGKRLTKISIYAFLFSDLLLLC--KRR--GESCFSVFDYCPRSMLTLAAGDSLPQLPTKDLK 1884
            ||: .|..|....|..||:|.||.|  |.|  |:. |.|     |:.:.:   |.:      :||
Zfish   644 KLS-AKNGTSQDRYLILFNDRLLYCVPKLRLIGQK-FGV-----RARIDV---DGM------ELK 692

  Fly  1885 DQAGKNLILMTLLENCDRKTVELVLSCPSVSDQQRWLQAMR 1925
            :.:..| :..|.|.:..::::|  |...:..:::.|:||::
Zfish   693 ETSSMN-VPRTFLVSGKQRSLE--LQARTEEEKRDWIQAIQ 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ExnNP_001097630.2 RhoGEF 1581..1763 CDD:279015 36/203 (18%)
PH_ephexin 1805..1931 CDD:269929 33/125 (26%)
SH3_ephexin1_like 1944..1998 CDD:212727
fgd1XP_688794.4 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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