DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Exn and si:ch73-15b2.5

DIOPT Version :9

Sequence 1:NP_001097630.2 Gene:Exn / 39900 FlyBaseID:FBgn0261547 Length:2029 Species:Drosophila melanogaster
Sequence 2:XP_686873.2 Gene:si:ch73-15b2.5 / 558551 ZFINID:ZDB-GENE-030131-5406 Length:532 Species:Danio rerio


Alignment Length:459 Identity:123/459 - (26%)
Similarity:214/459 - (46%) Gaps:65/459 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1483 EPHSLFSNEPLYQMYSAAKLESITRDL---EAHGSSDGYEEIGLQAKAKPEPLVKPRPTALQLVE 1544
            |...:.|:.||||.|   .:.|..:||   :..|.|:....:.|.....|..|   .||:  ::.
Zfish   119 ESEYINSSVPLYQEY---WMRSFKKDLNRAQLAGLSELVASVCLPGLKTPPSL---SPTS--VLS 175

  Fly  1545 PKNGPSR--TLWSEIPEVIHSCILPTLTSRERSLQEAKFEIITSEASYLKSLNLLRRHFMNHNAF 1607
            |....|:  .||.|:|:.  ..:|.:|::::..||||.||:|.|||||.|||      .:..|.|
Zfish   176 PPGPQSKPYALWQELPQA--KSVLYSLSAQDIQLQEAMFELIVSEASYQKSL------IVALNVF 232

  Fly  1608 LDSS----VLSAKDRKALFSYIVPVHECSERLLTELEACWQDNIMLLGLSRCIYEIAERHFHVYV 1668
            ..|:    :|:......|||.:..|...|||.|.:||:..:.::::..:...:....:....|||
Zfish   233 QCSAELKHILTRVQHHVLFSNLKDVCRVSERFLQDLESHLRQDVVMSQVGDVVLNHQKSFQQVYV 297

  Fly  1669 AFCEHQGRMDRTLRRLKESKESLAFQQHLERLEASPSCCGLNLHSFLMLPMQRITRLPLLIDAVF 1733
            .:..:....:..:.:|.:  |:..|...|::||..|.|....|.|||:||.|||||:.||::.|.
Zfish   298 PYITNMMYQEALVTQLLQ--ENRKFAPILKKLEKDPQCQRQTLKSFLILPFQRITRITLLLENVL 360

  Fly  1734 ------SKESPLNREEYESWKLTLALVQKVVGQCNEAANRWEQAFELERIARQLEFPSHVRALAI 1792
                  |...|..:|..|:       |:|:|.:|:....:.::...|..:.:.::| .:|:|:.:
Zfish   361 KRARGVSLNVPNVKEAIEA-------VRKIVEECDTRVQKMKRTELLVSLDKLVDF-GNVKAVPL 417

  Fly  1793 APVGVPRAGAKPRFLVKRGELTHLLWRGEDAKLTFGKRLTKISIYAFLFSDLLLLCKRRGESCFS 1857
            ...|        |.||:.|.|..|:..|........::    .:|..||:|||||..|.|:. |.
Zfish   418 ITRG--------RHLVQEGTLKQLIIGGNHKASIVSRK----DLYIHLFNDLLLLSVRSGQR-FL 469

  Fly  1858 VFDYC--PRSMLTLAAGDSLPQLPTKDLKDQAGKNLILMTLLENCDRKTVELVLSCPSVSDQQRW 1920
            |.|:.  |..:.......::..||::.|         |:.|.:..:|.:..|:|:..:..:::.|
Zfish   470 VQDHALFPDHVRAEEIKTTILGLPSESL---------LLHLTKKHNRSSSALILAARNELEKETW 525

  Fly  1921 LQAM 1924
            ::|:
Zfish   526 IKAL 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ExnNP_001097630.2 RhoGEF 1581..1763 CDD:279015 58/191 (30%)
PH_ephexin 1805..1931 CDD:269929 31/122 (25%)
SH3_ephexin1_like 1944..1998 CDD:212727
si:ch73-15b2.5XP_686873.2 RhoGEF 210..388 CDD:279015 58/192 (30%)
PH-like 412..532 CDD:302622 34/140 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 118 1.000 Domainoid score I5805
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001805
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12845
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.910

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