DRSC/TRiP Functional Genomics Resources

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Protein Alignment Exn and arhgef3l

DIOPT Version :9

Sequence 1:NP_001097630.2 Gene:Exn / 39900 FlyBaseID:FBgn0261547 Length:2029 Species:Drosophila melanogaster
Sequence 2:XP_005162130.1 Gene:arhgef3l / 553761 ZFINID:ZDB-GENE-050522-85 Length:532 Species:Danio rerio


Alignment Length:496 Identity:108/496 - (21%)
Similarity:193/496 - (38%) Gaps:136/496 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1521 IGLQAKAKPEPLVKPRPTALQLVE--PKNGPSRTLWSE-IPEVIHSCILPTLTSRERSLQEAKFE 1582
            |..:.:|:|.|   |.|.:.|...  |:...|: |||: :..:.|.     |:::|...||..:|
Zfish   113 ISFRTEARPLP---PMPRSRQKASSFPRRRSSQ-LWSDTVDNMSHE-----LSTKEIKRQEVIYE 168

  Fly  1583 IITSEASYLKSLNLLRRHFMNHNAFLDSSVLSAKDRKALF---SYIVPVHECSERLLTELEACWQ 1644
            :...|...::.|:|:::.:  :...|...:::..:...:|   ..::|:|   |.||..||.   
Zfish   169 LTQGEKQLIEDLSLVKKVY--YEPMLKLDIMTESELGQIFGTLDSLIPLH---EDLLVRLEG--- 225

  Fly  1645 DNIMLLGLSRCIYEIAERH------FHVYVAFCEHQGRMDRTLRRLKESKESLAFQQHLERLEAS 1703
                |.|..:.:.|:....      ...|:.:|.:|......|.:.|:.|.   .:|.|...:.|
Zfish   226 ----LRGAEKTVQEVGPTMMDWFPCLEAYITYCCNQVGAKALLDQKKQDKR---VEQFLRLCQES 283

  Fly  1704 PSCCGLNLHSFLMLPMQRITRLPLLIDAVFSKESPLNREEYESWKLTLALVQKVVGQCNEAANRW 1768
            .....|:|.:||.||..|:.:.|||:..: .|.:||:..:.::....:.|:|:::.:.|......
Zfish   284 SFSRKLDLWNFLDLPRSRLVKYPLLLKEI-QKSTPLDHPDEDALPQAMELIQRIITEVNLKTGEA 347

  Fly  1769 EQAF---------ELERIARQLEFPSHVRALAIAPVGVPRAGAKPRFLVKRGELTHLLWRGEDAK 1824
            |..|         :.:|:|       .::|              .|||...|||          |
Zfish   348 ECQFYRRGLCYAEDSQRVA-------EIQA--------------SRFLYCHGEL----------K 381

  Fly  1825 LTFGKRLTKISIYAFLFSDLLLLCK-----RRGESCFSVFDYCPRSMLTLAAGDSLPQLPTKDLK 1884
            .|.|::|     :.|||..:|:|.:     |.|...|.|:    |..:..|      .|..:||.
Zfish   382 STKGQKL-----HVFLFELVLVLTRPVAQDREGPVQFQVY----RQPMPAA------HLHLEDLP 431

  Fly  1885 D----QAGKNLILMT---LLENCDR-------KTVELVLSCPSVSDQQRWLQAMR---------- 1925
            |    .:|......|   .::||.|       |:....|......::|:|:..:|          
Zfish   432 DGEPSSSGSFRGAFTGNDKVKNCFRVSTTGRSKSQSHSLQANDSFNKQQWISCLRQAMVQSRDRQ 496

  Fly  1926 -------PPEAETPGEKLYESWDCPQVVAKHSYES--DEPD 1957
                   |.|..:|...||.:      :|:.:..|  |.||
Zfish   497 AQSSPCNPNERLSPEPALYNN------IAELTINSDVDMPD 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ExnNP_001097630.2 RhoGEF 1581..1763 CDD:279015 40/190 (21%)
PH_ephexin 1805..1931 CDD:269929 37/161 (23%)
SH3_ephexin1_like 1944..1998 CDD:212727 5/16 (31%)
arhgef3lXP_005162130.1 RhoGEF 165..341 CDD:279015 40/191 (21%)
PH_RhoGEF3_XPLN 355..489 CDD:269976 38/179 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3601
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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