DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Exn and arhgef16

DIOPT Version :9

Sequence 1:NP_001097630.2 Gene:Exn / 39900 FlyBaseID:FBgn0261547 Length:2029 Species:Drosophila melanogaster
Sequence 2:XP_012822093.1 Gene:arhgef16 / 549614 XenbaseID:XB-GENE-1015007 Length:715 Species:Xenopus tropicalis


Alignment Length:803 Identity:215/803 - (26%)
Similarity:348/803 - (43%) Gaps:160/803 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1238 ECSKRTEDVYENTDFGPERIPAP-ETKGPVHQEQAPV---LRAKQKNGKSL----RSRLRK--SL 1292
            :.|:||.:..:|..:.||:||:| |....:...|:|.   |..:|...|.|    ::::.:  |.
 Frog    42 DVSRRTLEPVDNASYIPEQIPSPVEASRVILSTQSPAAHKLGTQQMIPKGLAVATKTKVPRHHSF 106

  Fly  1293 VGSSFDTKQLSSLAPTRSTFYVEDPEGSLPALPLEPEIHGSGELDSGFSDKNCTPLPETPKFSTV 1357
            ..::| ||:|:...|.|.         |.|.:.|:   ....:||:|               .|:
 Frog   107 AATTF-TKELARNDPKRI---------SAPDICLD---LSEDDLDTG---------------GTL 143

  Fly  1358 ARKAKKEAKANRRRTTIGLRPNDPPPPPPPMTGNKSPLDPERELDAEQTTSWYAECGVFKQATNG 1422
            .|..:.:   :.|....|.:..:...|..|::                                 
 Frog   144 KRNLRNQ---SYRAAMKGFQNFEDSEPQKPVS--------------------------------- 172

  Fly  1423 AVSPRGDEPVTPTPSGHGGVSSWYAESGLYQTSGISVASSSGSSGVSTGNEAGLGDELSSEPHSL 1487
            .:.|..::...|.|...|.....:....:.:.:|                              .
 Frog   173 TLMPVSEDASVPPPRSPGRSKKTFGRKRMQRHAG------------------------------S 207

  Fly  1488 FSNEP-LYQMYSAAKLESITRDLEAHGSSDGYEEIGLQAKAKPEPLVKPRPTALQLVEPKNGPSR 1551
            |.::| |||.:....|.|..::    ...|..:|.|...:..|:.         .:|.....|::
 Frog   208 FKDDPRLYQEFRERGLNSNNQE----SDDDLLDEKGEAEQPVPDD---------GIVVKNYRPAQ 259

  Fly  1552 TLWSEIPEVIHSCILPTLTSRERSLQEAKFEIITSEASYLKSLNLLRRHFMNHNAFLDSSVLSAK 1616
            .:||::|||..|.||..::..||..|||.|||||||.||..||.:|.|.|......  ...::..
 Frog   260 LIWSQLPEVQESGILNKISPEERKRQEAIFEIITSEYSYQHSLGILVRLFKKSEEL--KQTITNT 322

  Fly  1617 DRKALFSYIVPVHECSERLLTELEACWQDNIMLLGLSRCIYEIAERHFHVYVAFCEHQGRMDRTL 1681
            :...|||.|..:.|.|:|...:||...::|..:..:|..:...|:..|..||::|.::....|||
 Frog   323 EHHHLFSNIAEIQEVSKRFFEDLEKRHKENPFIDNISDIVEHHAQNKFQPYVSYCSNEMYQQRTL 387

  Fly  1682 RRLKESKESLAFQQHLERLEASPSCCGLNLHSFLMLPMQRITRLPLLIDAVFSKESPLNREEYES 1746
            :||..:..:  |:..|:::|....|.||.:.|||:|||||:||||||:|.:..| ..:..:||..
 Frog   388 QRLMSTNGT--FKDTLKQIEMKAECGGLPMFSFLILPMQRVTRLPLLMDTICQK-MDMRTKEYGE 449

  Fly  1747 WKLTLALVQKVVGQCNEAANRWEQAFELERIARQLEFPSHVRALAIAPVGVPRAGAKPRFLVKRG 1811
            ....|..:.|:|.||||.|.:.|:..::..:..||||..      |.|..:..|.   |:|:|||
 Frog   450 TTHALKALSKLVKQCNEGARKMERTEQMYTLQTQLEFGK------IKPFPLISAS---RWLLKRG 505

  Fly  1812 EL-----THLLWRGEDAKLTFGKRLTKISIYAFLFSDLLLLCKRRGESCFSVFDYCPRSMLTLAA 1871
            ||     :.:.|:|      ||    |.|.|.|||:|:|::.|::.|..:.|.||.......:|.
 Frog   506 ELNLVEESGVFWKG------FG----KTSCYLFLFNDILIITKKKSEENYIVTDYVMMDQFAVAK 560

  Fly  1872 ---GDSLPQLP------TKDLKDQAGKNLILMTLLENCDRKTVELVLSCPSVSDQQRWLQAMRPP 1927
               ||  |||.      |...:...|..|..:.:.:|.:.|..|:||:..|:||:.||:.|:...
 Frog   561 IENGD--PQLSPPAKTGTSGPRSPNGPFLFQIHISKNSEGKQDEIVLAADSLSDRARWVAALERK 623

  Fly  1928 EAETPGEKLYESWDCPQVVAKHSYESDEPDVLQLELGDVVNVSRKLPDGWYQGERIRDGAVGWFP 1992
            |......:.... ...||....:|.:.:.|.:.|:..||:.|.:: .||||||||:|||..||||
 Frog   624 EDNKENSRSRRG-GLRQVEIIKAYLAKQADEISLQQADVMLVLQE-EDGWYQGERLRDGERGWFP 686

  Fly  1993 GSYTEELNSAHVRARNLKQRHRL 2015
            .|..:|:.:.....||:::..||
 Frog   687 ESCAKEITNQTAVERNVQRMERL 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ExnNP_001097630.2 RhoGEF 1581..1763 CDD:279015 64/181 (35%)
PH_ephexin 1805..1931 CDD:269929 45/139 (32%)
SH3_ephexin1_like 1944..1998 CDD:212727 24/53 (45%)
arhgef16XP_012822093.1 RhoGEF 287..465 CDD:366202 64/182 (35%)
PH_ephexin 488..627 CDD:269929 48/159 (30%)
SH3_ARHGEF16_26 639..692 CDD:212871 24/53 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 114 1.000 Domainoid score I5992
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48681
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3601
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.030

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