DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Exn and CG42674

DIOPT Version :9

Sequence 1:NP_001097630.2 Gene:Exn / 39900 FlyBaseID:FBgn0261547 Length:2029 Species:Drosophila melanogaster
Sequence 2:NP_649182.4 Gene:CG42674 / 40205 FlyBaseID:FBgn0261556 Length:1661 Species:Drosophila melanogaster


Alignment Length:1731 Identity:318/1731 - (18%)
Similarity:508/1731 - (29%) Gaps:656/1731 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   481 GSVGIPELAIVSEELKTPTSEEQAKKP--------KSVQNESQPNHPEELNQSNDKPSDELDLIM 537
            |....|.:.:.|.:  .|.:.:|.:.|        |.::.|.:......|.:|.|||        
  Fly     3 GGFAAPPITLASNQ--RPVALDQVEIPIPATDMHEKLLEKEGKTERTNLLGRSKDKP-------- 57

  Fly   538 GEEGDEEELRQKQRKHKYASIYEKLRFTFAKGRKSASPSPTKAQIREEVSIDEESIKDSTSEDMV 602
                      .|.:..|.:...|:||.:|.:|                   |..|::       :
  Fly    58 ----------PKDKPPKQSKFAERLRRSFRRG-------------------DHRSLE-------I 86

  Fly   603 TRKEDFTLDLPKEVIPRAEDLEDSSHALLVSPCFEADAKILDALEAVDLKLKVLNPLNDVTTADG 667
            .|:|           |..|:|:..|.|   :|                       |......:|.
  Fly    87 KRQE-----------PTPEELKAKSRA---TP-----------------------PPPSTLRSDN 114

  Fly   668 ERELLLAANDDFEQRILPNSSFVYQAANKQYSNNQILLNQAVNVTLVNAIEGEQMIMEQKQLMKV 732
            ...|..|    .....||............:.|..:||                           
  Fly   115 NNRLPFA----LSHLNLPGLGLGVGVGVGGHINPALLL--------------------------- 148

  Fly   733 RDLELTERDIDQPLKRAEKSPEKDDTLEPESLYEPITPVMDETKTEAQTSSLFKIYTKKSELVED 797
                      |.|          |:...||..|:.::.|.....:.:..||        .||.| 
  Fly   149 ----------DSP----------DECTPPEYAYQHLSSVATTNSSTSLESS--------CELGE- 184

  Fly   798 IYQTVEEASTVEVKPNNWLEGYESIAGSQEACPLTYDGYESFAPEEVVTTPTTPSATGTLGRNTR 862
                                    ::|||.:   .|  |.:....||.|:.....|.||.|....
  Fly   185 ------------------------LSGSQNS---VY--YWASMGGEVSTSAGAAGADGTAGTGAG 220

  Fly   863 D------ELPELPKPKRVL---NKSPIPLRPAPPKPQAKESEEDENIYDTIKGCYESMHCKATSS 918
            .      .:|...:.:|.|   |.|....:|......:....             .|..|..||.
  Fly   221 TGAGAGAAVPIEGQDRRRLETQNSSRSDQQPITTNASSAPGN-------------SSRSCSLTSD 272

  Fly   919 SSSGEATLTTDTISLSSNCYESISHIRRSRVATTQNQGHGSAGSCIQLSSSGSTLTISSDHKTNS 983
            |||...|...:.:..|||  ||      ||..    |||.:.|           .|:||.:.::.
  Fly   273 SSSIRLTRLQNFLFKSSN--ES------SRSC----QGHSNEG-----------FTVSSHNSSSG 314

  Fly   984 LYESSLAAAGCVVYGSASVGCRSSLGSSAGSRDSGKPGDKRSSIAGSSDNSDAWVDISDGEIGQA 1048
            .:|.    .|..:..|:.||         |..|          ..|.|...::..|.:||.:...
  Fly   315 EWEQ----LGAYLSSSSGVG---------GGHD----------FQGGSFPEESTPDETDGTLPVE 356

  Fly  1049 TTDATANEA--QFIVVRERFKPHRTRSPDWSKRIRDKRLQQKKAISCIEDDSDHYYETLSPLGNK 1111
            |:.:.....  |:.:.    .|:....|:.:.|.......:..|:...|..:|..     .|..|
  Fly   357 TSSSGGGGGYYQYTLT----SPNNPFLPEITARTYHSTYGEDGAVEGGEPTTDDL-----QLDGK 412

  Fly  1112 -----RHSTQLVRQSQDGNRSGGVRSSHRRS--------KNHSASAHTLGEHVVISDDYDSFETD 1163
                 ..|.||...|.  :|:|...|:|...        ...|:|:.|.|.|             
  Fly   413 YGCAGSRSAQLPTPSY--SRAGSQESTHSEGGGPPGPTPSPASSSSSTPGRH------------- 462

  Fly  1164 SDDHGDGEPDLRQRNYN-DSGVDMRNHRLPKPP--------PPQN-----------QVYEFVRKF 1208
                       |::.:: :|...:.:|:..:||        ||..           .....||..
  Fly   463 -----------RRKLFSLNSPTRLLHHQQQQPPPSGATSASPPSGGSSNDGGGGKFNSASLVRSL 516

  Fly  1209 KDFISSKKSPKGSQQKLYENTPASTLFYVECSKRTEDVYENTDFGPERIPAPETKGPVHQEQAPV 1273
            ..|:.|..|||.:..|....|....|                                    .|.
  Fly   517 NPFLPSVTSPKKAPHKQSAVTSPGCL------------------------------------TPD 545

  Fly  1274 LRAKQKNGKSLRSRLRKSLVGSSFDTK-QLSSLAPTRSTFYVEDPEGSLPALPLEP--------- 1328
            |..|::  :.||:.::..||.|..::| ||.|    :|..:::..:..:.|....|         
  Fly   546 LSTKRE--EFLRATMKICLVVSPPNSKLQLKS----KSLTHLDGLDSGVVACQQGPPGMATSTAS 604

  Fly  1329 ----EIHGSGELDSGFSDKNCTPLPETPKFSTVARKAKKEAKANRRRTTIGLRPNDPPPPP---- 1385
                ...|:|.....|:   .|..|     .::.|:|....|.  .||.:.|.|:.|.|..    
  Fly   605 TTATTAGGTGATTGLFA---TTGAP-----GSLGRQANVTEKG--ERTGVCLSPSAPQPSSHASP 659

  Fly  1386 --PPMTGNKSP----------LDPERELDAEQTTSWYAEC--------GVFKQ--------ATNG 1422
              ||....::|          |.|  .|| |.||:..:.|        |.|.|        ...|
  Fly   660 HHPPTIYTQAPQVVRRMPSLMLSP--TLD-ETTTTASSSCFGTGHPSAGSFHQHQHHHHHHQPTG 721

  Fly  1423 AVSPRGDEPVTPTPSGHGGVSSWYAESGLYQTSGISVASSSGSS------------GVSTGNEAG 1475
            :|| ......|.|.|.|...||.:     :|:.|.:.|:||.|:            |...|..||
  Fly   722 SVS-TASCTATSTTSTHAVPSSKH-----FQSVGEAAATSSSSTLSPHSATSATLGGGGGGGGAG 780

  Fly  1476 LG---------------------------------DELSSEPHSL-----FSNEPLYQMYSAAK- 1501
            .|                                 :..|||..|:     .|.:|..:...|.| 
  Fly   781 GGGLTSPVGCSTSSGSTVKKKSSFMKRKKPLLTRSEVSSSEFFSVSFCLDSSQQPDEEFIPATKG 845

  Fly  1502 ---LESITRDLEAHGSS---------------------------------------------DGY 1518
               |.:::..|.....|                                             .|.
  Fly   846 VTLLNALSHALRRRNLSFTQITITDNNPTPSFLDAGPSLLPVSVDEQTDVESLAGHHLCITERGS 910

  Fly  1519 EEIGLQAKA-----KPEPLVKP-----------------------------RPTALQLVE----- 1544
            ....||..|     :|.|.:.|                             .|...||.|     
  Fly   911 NRKPLQKAASFGSRQPPPRLLPSVSTEETSESGVAPGKQIKQRWSSIFGIKNPQQSQLCELLNSY 975

  Fly  1545 PKNG-PSR--TLWSEIPEVIHSCIL--------------PTLTSRERSLQEAKFEIITSEASYLK 1592
            .||| |.|  ::..:.|::::|...              .:::..|..:|.|.:|::|:|..|:.
  Fly   976 AKNGVPQRPDSMSFDHPDLVNSLAYLQYMHKSWRDFVNSDSMSESEVKIQTAIWELVTTEVYYIH 1040

  Fly  1593 SLNLLRRHFMN-HNAFLDSSVLSAKDRKALFSYIVPVHECSERLLTELEACWQDNIMLLGLSRCI 1656
            :|..:...|:. ..|..:..:|...|:..|||.:..|.|.:.:..|            |.|...:
  Fly  1041 ALQTVTDLFLACLEAVQEEGLLIDVDQARLFSNVRAVCEANIKFWT------------LWLYPMV 1093

  Fly  1657 YEIAERH------------------FHVYVAFCEHQGRMDRTLRRLKESKESLAFQQHLERLEAS 1703
            ...|..|                  |..|..:|..|.......:.|..:  :..|..:|...|:.
  Fly  1094 AHSAITHEPLRCAFFQEGFLSFASIFAPYKIYCAEQSTCQFYCKELNHN--NALFTSYLAWCESQ 1156

  Fly  1704 PSCCGLNLHSFLMLPMQRITRLPLLIDAVFSKESPLNREEYESWKLTLALVQKVVGQCNEAANRW 1768
            ..|..|.|...::.||||:|:..||:.|:  |:...:.||.|:..:.:..|:..||..|......
  Fly  1157 KMCNRLRLADIVVRPMQRLTKYSLLLAAI--KKHMSDVEEIEAIDVMMHSVENFVGSVNNHLTMR 1219

  Fly  1769 EQAFELERIARQLEFPSHV------------RALAIAPVGVPRAGAKPRFLVKRGELTHLLWRGE 1821
            ::...|:.:..::|....|            :...:..:..|..|. |.:.|:     ||...|:
  Fly  1220 QENERLKGVMVRIESYDVVDTNNEVLDKMIKQNSQMFDLCAPMRGC-PAYHVR-----HLFMEGD 1278

  Fly  1822 DAKLTFGKRLTKISIYAFLFSDLLLLCK---RRGESCFSVFDYCPRSMLTLAAGDSLPQLPTKDL 1883
            .   .|...|.|..::.||.:||||:||   :||.....|.              ..|.|..:.:
  Fly  1279 H---KFKDNLGKSDVHCFLLTDLLLVCKTIAKRGLGALKVI--------------RQPYLTDQLI 1326

  Fly  1884 KDQAGKNLILMTLLENCDRKTVELVLSCPSVSDQQRWLQAM 1924
            ...|..|.:....|......|....|.|   ::.:.|..|:
  Fly  1327 VQLAPNNTLNCVYLNEFQVATTAFTLQC---TEAKNWYDAL 1364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ExnNP_001097630.2 RhoGEF 1581..1763 CDD:279015 45/200 (23%)
PH_ephexin 1805..1931 CDD:269929 28/123 (23%)
SH3_ephexin1_like 1944..1998 CDD:212727
CG42674NP_649182.4 RhoGEF 1027..1213 CDD:279015 46/201 (23%)
PH_PLEKHG5_G6 1271..1366 CDD:270064 27/119 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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