Sequence 1: | NP_001097630.2 | Gene: | Exn / 39900 | FlyBaseID: | FBgn0261547 | Length: | 2029 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038958459.1 | Gene: | Arhgef28 / 361882 | RGDID: | 1307061 | Length: | 1714 | Species: | Rattus norvegicus |
Alignment Length: | 1460 | Identity: | 262/1460 - (17%) |
---|---|---|---|
Similarity: | 450/1460 - (30%) | Gaps: | 515/1460 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 780 QTSSLFKIYTKKSELVEDIYQTVEEASTVEVKPNNWL------------EGYESI---AGSQEAC 829
Fly 830 PLTY-DGYESFAPEEVVT-----TPTTPSATGTLGRNTRDELP-------------ELPKPKRVL 875
Fly 876 NKSP------------IPLRPAPPK--------PQAKESEEDENIYDTIKGCYESMHCKATSSSS 920
Fly 921 SGEATLTTDTISLSSNCYESISHIRRSRVATTQNQGHGSAGSCIQLSSSGSTLTISSDHKTNSLY 985
Fly 986 ESSLAAAGCVVYGSA---------SVGCRSSLGSSAG-------SRDSGK-PGDK-------RSS 1026
Fly 1027 IAGSSDNSD------------------AWVDISDGEIGQATTDATANEAQFIVVRE--------- 1064
Fly 1065 -------RFKPHRTRS---PDWSKRI---------------RDKRLQQKKAISCIEDDSDH---- 1100
Fly 1101 --------YYETLSPLGNKRHST--QLVRQSQDGNRSG-------GVRSSHRRSKNHSASAHTLG 1148
Fly 1149 EHVVISDDYDSFETDSDDHGDGEPD--------------LRQRNYNDSGVDMRNHRLPKPPPPQN 1199
Fly 1200 QVYEFVRKFKDFISSK-------KSPKGSQQKLYENTPASTLFYVECSKRTEDVYENTDFGPERI 1257
Fly 1258 PAPETKGPVHQEQAPVLRAKQKNGKSLRSRLRKSLVGSSFDTKQLSSLAPTRSTFYVEDPEGSLP 1322
Fly 1323 ALPLEPEIHGSGELD----SGFSDKNC--TPLPETPKFSTVARKAKKEAKANRRRTTIGLRP-ND 1380
Fly 1381 PPPP-----PPP------------MTGNKSPLD---PERELDAEQTTSWYAECGVFKQATNGAVS 1425
Fly 1426 PRGDEPVTPTPSGHGGVSSWYAES---GLYQTSGISVASSSGSSGVSTGNEAGLGDELSSEPHSL 1487
Fly 1488 FSNEPLYQMYSAAKLESITRDLEAHGSSDGYEEIGLQAKAKPEPLVKPRPTALQLVEPKNGPSRT 1552
Fly 1553 LWSEIPEVIHSCILPTLTSRER----SLQEAKFEIITSEASYLKSLNLLRRHF---MNHNAFLDS 1610
Fly 1611 SVLSAKDRKALFSYIVPVHECSERLL------------TELEACWQDN----IMLLG---LSRCI 1656
Fly 1657 YEIAERHFHVYVAFCEHQGRMDRTLRRLKESKESLAFQQH--------LERLEASPSCCGLNLHS 1713
Fly 1714 FLMLPMQRITRLPLLIDAV--FSKESPLNREEYESWKLTLALVQKVVGQCNEAANRWEQAFELER 1776
Fly 1777 IARQLEFPSHVRALAIAPVGVPRAG---AKPRFLVKRGELTH---LLWRGEDAKLTFGKRLTKIS 1835
Fly 1836 IYAFLFSDLLLLCKRRGES-CFSVFDYCP-----------------RSMLTLAAGDSLPQLPTKD 1882
Fly 1883 LKDQAGKNLILMTLLENCDRKTVELVLSCP-------SVSDQQRWLQAMRPPEAETPGEKLYESW 1940
Fly 1941 DCPQVVAKHSYE----SDEPDVLQLELGDV 1966 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Exn | NP_001097630.2 | RhoGEF | 1581..1763 | CDD:279015 | 45/213 (21%) |
PH_ephexin | 1805..1931 | CDD:269929 | 29/153 (19%) | ||
SH3_ephexin1_like | 1944..1998 | CDD:212727 | 4/27 (15%) | ||
Arhgef28 | XP_038958459.1 | C1_p190RhoGEF | 659..719 | CDD:410426 | 14/61 (23%) |
RhoGEF | 866..1055 | CDD:214619 | 45/214 (21%) | ||
PH_p190RhoGEF | 1100..1200 | CDD:275430 | 19/115 (17%) | ||
DUF5401 | <1368..>1536 | CDD:375164 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |