DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Exn and ARHGEF16

DIOPT Version :9

Sequence 1:NP_001097630.2 Gene:Exn / 39900 FlyBaseID:FBgn0261547 Length:2029 Species:Drosophila melanogaster
Sequence 2:XP_016856538.1 Gene:ARHGEF16 / 27237 HGNCID:15515 Length:726 Species:Homo sapiens


Alignment Length:782 Identity:223/782 - (28%)
Similarity:353/782 - (45%) Gaps:125/782 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1296 SFDTKQLSSLAPTRSTFYVEDPEGSLPALPLEPEIHGSGELDSGFSDKNCTPLPE-TPKFSTVAR 1359
            ||...:..|..|...:......:.||....|....|....||:|.:..:..|:.. :|       
Human     2 SFRAMRAGSRTPQPPSMAQRHSDSSLEEKLLGHRFHSELRLDAGGNPASGLPMVRGSP------- 59

  Fly  1360 KAKKEAKANRRRTTIGLRPNDPPPPPPPMTGNKSP--------------LDPERELDAEQTTSWY 1410
                     |.|.....:|..|.||.|...|::.|              |..::.:......:..
Human    60 ---------RVRDDAAFQPQVPAPPQPRPPGHEEPWPIVLSTESPAALKLGTQQLIPKSLAVASK 115

  Fly  1411 AECGVFKQATNGAV----SPRGDEPVTPTPS----------GHGGVSSWYAESGLYQTSGISVAS 1461
            |:.....|:...||    :.|.|..:.|.||          ..||:......:..|:      |:
Human   116 AKTPARHQSFGAAVLSREAARRDPKLLPAPSFSLDDMDVDKDPGGMLRRNLRNQSYR------AA 174

  Fly  1462 SSGSSGVSTGNEAGLGD------------ELSSEPHS------------------LFSNEP-LYQ 1495
            ..|     .|...|.||            |..|:||:                  .|.::| |||
Human   175 MKG-----LGKPGGQGDAIQLSPKLQALAEEPSQPHTRSPAKNKKTLGRKRGHKGSFKDDPQLYQ 234

  Fly  1496 MYSAAKLESITRDLEAHGSSDGYEEIGLQAKAKPEPLVKPRPTALQLVEPKNGPSRTLWSEIPEV 1560
                   |...|.|.....||  ::| |...:.||...|...|   :|.....|::..||::|||
Human   235 -------EIQERGLNTSQESD--DDI-LDESSSPEGTQKVDAT---IVVKSYRPAQVTWSQLPEV 286

  Fly  1561 IHSCILPTLTSRERSLQEAKFEIITSEASYLKSLNLLRRHFMNHNAFLDSSVLSAKDRKALFSYI 1625
            :...||..|::.||..|||.|||:|||.||..||::|...|:.....  .:.::..:...|||.|
Human   287 VELGILDQLSTEERKRQEAMFEILTSEFSYQHSLSILVEEFLQSKEL--RATVTQMEHHHLFSNI 349

  Fly  1626 VPVHECSERLLTELEACWQDNIMLLGLSRCIYEIAERHFHVYVAFCEHQGRMDRTLRRLKESKES 1690
            :.|...|:|...:||...:..:::..:|..:.|.||:|||.|:|:|.::....|||::|..|  :
Human   350 LDVLGASQRFFEDLEQRHKAQVLVEDISDILEEHAEKHFHPYIAYCSNEVYQQRTLQKLISS--N 412

  Fly  1691 LAFQQHLERLEASPSCCGLNLHSFLMLPMQRITRLPLLIDAVFSKESPLNREEYESWKLTLALVQ 1755
            .||::.|..:|..|:|.||.:.|||:|||||:||||||:|.:..|... :.|.|::....|..:.
Human   413 AAFREALREIERRPACGGLPMLSFLILPMQRVTRLPLLMDTLCLKTQG-HSERYKAASRALKAIS 476

  Fly  1756 KVVGQCNEAANRWEQAFELERIARQLEFPSHVRALAIAPVGVPRAGAKPRFLVKRGELTHLLWRG 1820
            |:|.||||.|:|.|:..::..:..||:| |.|::|.:.        :..|:|:||||    |:..
Human   477 KLVRQCNEGAHRMERMEQMYTLHTQLDF-SKVKSLPLI--------SASRWLLKRGE----LFLV 528

  Fly  1821 EDAKLTFGKRLTKISIYAFLFSDLLLLCKRRGESCFSVFDYCPRSMLTL--AAGDSLPQLPTKDL 1883
            |:..| |.|..::.:.|.|||:|:|::.|::.|..:.|.||...:.:.:  .....|| ||....
Human   529 EETGL-FRKIASRPTCYLFLFNDVLVVTKKKSEESYMVQDYAQMNHIQVEKIEPSELP-LPGGGN 591

  Fly  1884 KDQAGKNLILMTLLENCDRKTVELVLSCPSVSDQQRWLQAMRPPEAETPGEKLYESWDCPQVVAK 1948
            :..:..:...:|||.|.:.:..:|:||..|.||:.||:.|:...|.:..|  |....|.|||...
Human   592 RSSSVPHPFQVTLLRNSEGRQEQLLLSSDSASDRARWIVALTHSERQWQG--LSSKGDLPQVEIT 654

  Fly  1949 HSYESDEPDVLQLELGDVVNVSRKLPDGWYQGERIRDGAVGWFPGSYTEELNSAHVRARNLKQRH 2013
            .::.:.:.|.:.|:..|||.|.:: .|||..|||:|||..||||..:...:.|......|:::..
Human   655 KAFFAKQADEVTLQQADVVLVLQQ-EDGWLYGERLRDGETGWFPEDFARFITSRVAVEGNVRRME 718

  Fly  2014 RL 2015
            ||
Human   719 RL 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ExnNP_001097630.2 RhoGEF 1581..1763 CDD:279015 67/181 (37%)
PH_ephexin 1805..1931 CDD:269929 40/127 (31%)
SH3_ephexin1_like 1944..1998 CDD:212727 21/53 (40%)
ARHGEF16XP_016856538.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5908
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4837
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41472
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12845
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3601
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.890

Return to query results.
Submit another query.