DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Exn and ngef

DIOPT Version :9

Sequence 1:NP_001097630.2 Gene:Exn / 39900 FlyBaseID:FBgn0261547 Length:2029 Species:Drosophila melanogaster
Sequence 2:XP_002933399.1 Gene:ngef / 100487663 XenbaseID:XB-GENE-950834 Length:691 Species:Xenopus tropicalis


Alignment Length:755 Identity:215/755 - (28%)
Similarity:336/755 - (44%) Gaps:108/755 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1284 LRSRLRKSLVGSSFDTKQLSSLAPTRSTFYVEDPEGSLPALPLEPEIHGSGELDSGFSDKNCTPL 1348
            :|..:|::|. .|.|::.........|...:.:|:     :..|.|.....::|...|.....|:
 Frog     1 MRRFMRETLT-QSRDSRMGRDALTASSVINMREPQ-----IKNEEESEDENQMDESDSQTRHMPI 59

  Fly  1349 PETPKFSTVARKAKKEAKANRRRTTIGLRPNDPPPPPPPMTGNKSPLDPERELDAEQTTSWYAEC 1413
            ....:|....|     .:...||..:..|..                   .|:| .|||:     
 Frog    60 RRNSRFYRSMR-----VRNRHRRDRLSSREG-------------------MEID-NQTTA----- 94

  Fly  1414 GVFKQATNGAVSPRGDEPVTPTPSGHGGVSSWYAESGLYQTSGISVASSSGSSGVSTGNEAGLGD 1478
               :|..:|:.|........|| :|..|...:....   .||.....|||.|...::.:||  ..
 Frog    95 ---QQTYDGSRSIHLSVHYNPT-TGPAGYREYLPSE---DTSNPHEDSSSPSECATSNSEA--PP 150

  Fly  1479 ELSSEPHSLFSN-----EPLYQMYSAAKLESITRDLEAHGSSDGY-EEIGLQAKAKPEPLVKPRP 1537
            .:...|...|..     |.|||.|   :.:|...::|.....|.| :.......::..||..|.|
 Frog   151 TIYPLPSDSFKTIIDHIEFLYQEY---RDKSTQHEIETRRLQDNYVQSAETSNNSQNTPLGSPPP 212

  Fly  1538 TALQLVEPKNGPSR-----------TLWSEIPEVIHSCILPTLTSRERSLQEAKFEIITSEASYL 1591
                 :|.:...|.           .||.::|:|..|.:|..|...|..||||.||::||||||.
 Frog   213 -----IENQRANSTFSRFESSCSGFNLWQDLPDVRKSGVLALLQPEEVKLQEAMFELLTSEASYY 272

  Fly  1592 KSLNLLRRHFMNHNAFLDSSVLSAKDRKA----LFSYIVPVHECSERLLTELEACWQDNIMLLGL 1652
            |||.|:..|||      ||..|.|...::    :||.::.|...|||.|..||..:::||::..:
 Frog   273 KSLRLVVSHFM------DSERLRASLHQSEIHFIFSNVLEVLATSERFLLALEQRFEENIVISDV 331

  Fly  1653 SRCIYEIAERHFHVYVAFCEHQGRMDRTLRRLKESKESLAFQQHLERLEASPSCCGLNLHSFLML 1717
            ...:||.||:||.|||.:..:|...:|..|:|.:.:..  |::.:..||..|.|.||...|||:|
 Frog   332 CDIVYEHAEKHFVVYVTYVCNQTYQERAYRKLLQERPE--FRESVGHLETDPVCRGLPFSSFLIL 394

  Fly  1718 PMQRITRLPLLIDAVFSKESPLNREEYESWKLTLALVQKVVGQCNEAANRWEQAFELERIARQLE 1782
            |.||||||.||:..:.:|....:..|..:.:....| :|:|..||:...:..:..:|..|.:.||
 Frog   395 PFQRITRLKLLVQNILTKVEEGSEREVSALQAHREL-EKLVRACNDGVRKMSRTEQLISIEKTLE 458

  Fly  1783 FPSHVRALAIAPVGVPRAGAKPRFLVKRGELTHLLWRGEDAKLTFGKRLTKISIYAFLFSDLLLL 1847
            |  .::::.|.        :..|:|:|:|||..:  .|.....|...:.....:|.|||:||||:
 Frog   459 F--KIKSVPII--------SHSRWLMKQGELQQM--SGPRTSRTLRTKKLFRPVYLFLFNDLLLM 511

  Fly  1848 CKRRGESCFSVFDYCPRSMLTLAAGDSLPQLPTKDLKDQAG--KNLILMTLLENCDRKTVELVLS 1910
            ||......:.|||...|.:|.:           ::|:||..  .|:.::.||||...:....:|.
 Frog   512 CKPLTGERYQVFDVAARGLLRV-----------EELEDQGQTLANVFILKLLENAHEREFTYMLK 565

  Fly  1911 CPSVSDQQRWLQAMRPPEAETPGEKLYESWDCPQVVAKHSYESDEPDVLQLELGDVVNVSRKLPD 1975
            ..|.|:.:||:.::.|...........:..|||||...|.|.|.|||.|.|:|.|::||..|..|
 Frog   566 ATSQSEMKRWMTSLVPNRRTKFVSMSAKLLDCPQVQCVHPYVSQEPDELSLDLADILNVLDKTED 630

  Fly  1976 GWYQGERIRDGAVGWFPGSYTEELNSAHVRARNLKQRHRL 2015
            ||..|||:.|...||||.:..||:.:.::|.:|||:..|:
 Frog   631 GWVFGERLHDQEKGWFPRTVVEEILNPNIRTQNLKECFRV 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ExnNP_001097630.2 RhoGEF 1581..1763 CDD:279015 69/185 (37%)
PH_ephexin 1805..1931 CDD:269929 37/127 (29%)
SH3_ephexin1_like 1944..1998 CDD:212727 26/53 (49%)
ngefXP_002933399.1 RhoGEF 260..438 CDD:395496 69/186 (37%)
PH_ephexin 460..586 CDD:269929 38/146 (26%)
SH3_ephexin1 599..653 CDD:212872 26/53 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 114 1.000 Domainoid score I5992
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001805
OrthoInspector 1 1.000 - - otm48681
Panther 1 1.100 - - O PTHR12845
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1705
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.010

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