DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ogdh and ogdh-2

DIOPT Version :10

Sequence 1:NP_730226.3 Gene:Ogdh / 39899 FlyBaseID:FBgn0010352 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_001256410.1 Gene:ogdh-2 / 179674 WormBaseID:WBGene00014098 Length:911 Species:Caenorhabditis elegans


Alignment Length:870 Identity:336/870 - (38%)
Similarity:485/870 - (55%) Gaps:85/870 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 IIRSYQIRGHNIAHLDPLEIN--------TPELPGNSSTKSIYANFSFGEQDMDRQFKLPSTTFI 189
            :|.:::..|:..|.||||.:.        .|.:.|.|..:::..|||                  
 Worm    58 LINAFRRYGYLEADLDPLGLRKVESVAELDPAIYGLSLDENVKGNFS------------------ 104

  Fly   190 GGDEASLPLKEILNRLENVYCNKIGVEFMFINSLEQCNWIRKRFETPGVLNFSPEEKRLILARLT 254
                    |.::..:|.::||....:|||.||:.|:..||.:.||.........||...|...:.
 Worm   105 --------LHDLAEQLRHIYCGPTAIEFMHINNWEERQWISQNFENCIAEELRKEELLRIGDLML 161

  Fly   255 RATGFEAFLAKKYSSEKRFGLEGCEIMIPALKEIIDVSTELGVESVIMGMPHRGRLNTLANVCRK 319
            :...|:.||:.|:.:.||:|.||.|.|.....|:.:.:.|..||.:|:|:.||||||.|..:...
 Worm   162 KCENFDKFLSTKFPTLKRYGAEGAESMFAFFSELFEGAAEKQVEEIIIGIAHRGRLNLLTQLMDF 226

  Fly   320 PLNQIFTQFAGL----EAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQG 380
            |...:|.:..|.    |:| |.:|||..||.:..:  .:.:..|:.:.::.||||||||:||..|
 Worm   227 PPVHMFRKIKGRAEFPESA-DAAGDVLSHLVSSFD--YKGSEGNVHVTMLPNPSHLEAVNPVAMG 288

  Fly   381 KTRAE--QFYRGD--------QEGKKVMSILIHGDAAFCGQGVVYETMHLSDLPDYTTHGTIHVV 435
            |.||.  ...:||        :.|..|:::|:|||.||.|||||:|::.||..|.:...||:|:|
 Worm   289 KARARAWSMNKGDYSPDERSARAGDSVLNVLVHGDGAFTGQGVVWESIALSQAPHFRLGGTVHLV 353

  Fly   436 ANNQIGFTTDPRFSRSSPYCTDVARVVNAPIFHVNADDPEAVMHVCKVAAEWRATFHKDCVIDLV 500
            .||||.||.:....|||.:|||:|:....|:.|||.|.||.|:...::|..:|..|.||..|:||
 Worm   354 TNNQIAFTAESSVGRSSTHCTDIAKAFEYPVIHVNGDHPEEVVKATRLALAYRERFRKDVFINLV 418

  Fly   501 GYRRNGHNEIDEPMFTQPLMYQKIRKHKNCLDLYADKLIAEGTVTAEEVKSVAAKY-ENICEEAF 564
            .:||.||||:|:|.||.|:||:::...::...|:.|:|:.||..|.|.||....|: |.:..|  
 Worm   419 CFRRWGHNELDDPTFTSPVMYKEVEARESVPRLFLDRLVEEGFTTEEAVKEQLQKHTEQLNNE-- 481

  Fly   565 ALAKTETHVKYKDWLDSPWSGFFEGKDPLKVAPTGVKEETLIHIGNRFSSPPPNAAEFVIHKGLL 629
             |.|.::.|.........|.||.:....::...|||..:.|..||......|   .:|..||.|.
 Worm   482 -LKKVDSTVPIDISHRGRWEGFKQAPKAIESWDTGVATDLLRFIGAGSVKVP---EDFDTHKHLY 542

  Fly   630 RV---LAARKAMVDEKVADWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQLVDKA 691
            ::   ...:|....|.: |||..|||||||:|.||..||:|||||.||||.|||.:    :||::
 Worm   543 KMHIDSRMQKMQTGEGI-DWATAEAMAFGSILLEGNDVRISGQDVGRGTFCHRHAM----MVDQS 602

  Fly   692 T---YNSLQHMYPDQA-PYSVSNSSLSEYAVLGFEHGYSMTNPNALVLWEAQFGDFSNTAQSIID 752
            |   :..|..:..:|. ...|:|:.|||.|:||||.|:|..||..|.:||||||||.|.||.|||
 Worm   603 TDHIHIPLNELVEEQKNQLEVANNLLSEEAILGFEWGFSSENPRRLCIWEAQFGDFFNGAQIIID 667

  Fly   753 QFISSGQSKWVRQSGLVMLLPHGMEGMGPEHSSCRVERFLQMSSDDPDYFPPESDEFGVRQLHDI 817
            .|::|.:|||:..|||.||||||.:|.||||||||:|||||:.....|..|.:.:        ::
 Worm   668 TFLASAESKWLTSSGLTMLLPHGFDGAGPEHSSCRMERFLQLCDSREDQTPVDGE--------NV 724

  Fly   818 NWIVANCSTPANYYHILRRQIALPFRKPLILCTPKSLLRHPEAKSPFSEMSEGSEFQRIIPDNGP 882
            |..|||.:|.|.|:|:||||:...:|||||:..||.|||||:|.|..:|...|:.:|.:|.:.  
 Worm   725 NMRVANPTTSAQYFHLLRRQVVPNYRKPLIVVGPKILLRHPKAASTINEFGPGTTYQNVISEE-- 787

  Fly   883 AGQNPSNVKKVVFCSGRVYYDLTKTRREKQLEGEIAIVRVEQISPFPFDLVKEQANL--YKNA-E 944
            ...:...:|||:|.||:.:.::.|.|.|:.|:..:||||||.:.|||  :|..||.|  |..| :
 Worm   788 HATSSQKIKKVIFVSGKHWINVEKARDERGLKDSVAIVRVEMLCPFP--VVDLQAVLKKYPGAQD 850

  Fly   945 LVWAQEEHKNQGSWTYVQPRFLTAL 969
            .||:|||.:|.|:|::|:|||..||
 Worm   851 FVWSQEEPRNAGAWSFVRPRFENAL 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OgdhNP_730226.3 SucA 53..1102 CDD:440333 336/870 (39%)
ogdh-2NP_001256410.1 SucA 45..911 CDD:440333 336/870 (39%)

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