DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nc73EF and ogdhl

DIOPT Version :9

Sequence 1:NP_001097629.1 Gene:Nc73EF / 39899 FlyBaseID:FBgn0010352 Length:1105 Species:Drosophila melanogaster
Sequence 2:XP_002933951.2 Gene:ogdhl / 100497480 XenbaseID:XB-GENE-984152 Length:1018 Species:Xenopus tropicalis


Alignment Length:987 Identity:614/987 - (62%)
Similarity:752/987 - (76%) Gaps:36/987 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MAH--------KNFATWLL-KSSSSQQMAKVTAAAAVRTYNSAAAEPFANGSTASYVEEMYNAWL 70
            |:|        |.:.|.|| |.||:.:    |.......|:|.|.|||.:|:.:|||||||.|||
 Frog     1 MSHLRTVAAKLKPYCTGLLVKHSSTPR----TLPQRCSVYSSGAKEPFLSGTNSSYVEEMYYAWL 61

  Fly    71 RDPTSVHTSWDAYFRSNSYVSP-------PNLAPVQANTLPLTAFNFGGAVAGAAPDSKTIDDHL 128
            .:|.|||.|||.:|:|....:|       |:|..:::.   |.:.:..|.....|...|.:::||
 Frog    62 ENPKSVHKSWDIFFQSADAGTPQCETRGVPSLTGIESK---LQSLSSQGLATAPAKAEKIVEEHL 123

  Fly   129 AVQAIIRSYQIRGHNIAHLDPLEINTPEL----PGNSSTKSIYANFSFG--EQDMDRQFKLPSTT 187
            |||::||:||||||::|.||||.|...:|    |.:..|......| :|  |.|:|:.|:||:||
 Frog   124 AVQSLIRAYQIRGHHVAQLDPLGILDADLDSFVPSDLITTLDKLGF-YGLHEGDLDKVFRLPTTT 187

  Fly   188 FIGGDEASLPLKEILNRLENVYCNKIGVEFMFINSLEQCNWIRKRFETPGVLNFSPEEKRLILAR 252
            :|||.:::|.|:||:.||||.||..||:||||||.:|||.|||::|||||::.|:.||||.:|||
 Frog   188 YIGGIDSTLSLREIIRRLENSYCQHIGLEFMFINDVEQCQWIRQKFETPGIMKFTNEEKRTLLAR 252

  Fly   253 LTRATGFEAFLAKKYSSEKRFGLEGCEIMIPALKEIIDVSTELGVESVIMGMPHRGRLNTLANVC 317
            |.|:|.||.|||:|:||||||||||||:||||||.|||.|:|:|:|.||:|||||||||.||||.
 Frog   253 LVRSTRFEDFLARKWSSEKRFGLEGCEVMIPALKVIIDKSSEMGLEYVILGMPHRGRLNVLANVI 317

  Fly   318 RKPLNQIFTQF-AGLEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGK 381
            ||.|:|||.|| ..|||:|:||||||||||.|.||:||.|||.|.|::|||||||||.|||||||
 Frog   318 RKDLDQIFCQFDPKLEASDEGSGDVKYHLGMYHERINRATNKKITLSLVANPSHLEAADPVVQGK 382

  Fly   382 TRAEQFYRGDQEGKKVMSILIHGDAAFCGQGVVYETMHLSDLPDYTTHGTIHVVANNQIGFTTDP 446
            |:||||||||.:|.||||:|:||||||.||||||||.||||||.|||:||||:|.||||||||||
 Frog   383 TKAEQFYRGDSQGNKVMSVLVHGDAAFAGQGVVYETFHLSDLPSYTTNGTIHIVVNNQIGFTTDP 447

  Fly   447 RFSRSSPYCTDVARVVNAPIFHVNADDPEAVMHVCKVAAEWRATFHKDCVIDLVGYRRNGHNEID 511
            |.:|||||.|||||||||||||||||||||||:||.||||||.||:||.|:|||.|||:||||:|
 Frog   448 RMARSSPYPTDVARVVNAPIFHVNADDPEAVMYVCSVAAEWRNTFNKDVVVDLVCYRRSGHNEMD 512

  Fly   512 EPMFTQPLMYQKIRKHKNCLDLYADKLIAEGTVTAEEVKSVAAKYENICEEAFALAKTETHVKYK 576
            ||||||||||::|.|....|..||||:||||.|:.:|.:...|||:.|||||:|.:|.:..:..|
 Frog   513 EPMFTQPLMYKQIHKQVPVLKKYADKMIAEGMVSLQEFEEEIAKYDRICEEAYARSKDKKILNIK 577

  Fly   577 DWLDSPWSGFF--EGK-DPLKVAPTGVKEETLIHIGNRFSSPPPNAAEFVIHKGLLRVLAARKAM 638
            .||||||.|||  :|: ..:...|||:.|:.|.||||..||.|  ..:|.||.||.|:|.:|..|
 Frog   578 HWLDSPWPGFFTLDGEPKSMTCPPTGIPEDLLSHIGNIASSVP--VTDFKIHGGLSRILKSRLEM 640

  Fly   639 VDEKVADWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQLVDKATYNSLQHMYPDQ 703
            ...:..||||.|.|||||||||||||||||||||||||||||||||.|.||:.|...:.|::|:|
 Frog   641 TKNRTVDWALAEYMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHDQEVDRKTCVPMNHLWPNQ 705

  Fly   704 APYSVSNSSLSEYAVLGFEHGYSMTNPNALVLWEAQFGDFSNTAQSIIDQFISSGQSKWVRQSGL 768
            |||:|.|||||||.|||||.|::|.:||||||||||||||.||||.||||||||||:||||.:|:
 Frog   706 APYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFYNTAQCIIDQFISSGQAKWVRHNGI 770

  Fly   769 VMLLPHGMEGMGPEHSSCRVERFLQMSSDDPDYFPPESDEFGVRQLHDINWIVANCSTPANYYHI 833
            |:|||||||||||||||.|.|||||||:||.|.:|..:::|.|.||:|.||||.||||||:|:|:
 Frog   771 VLLLPHGMEGMGPEHSSARPERFLQMSNDDSDAYPEFTNDFEVCQLYDCNWIVVNCSTPASYFHV 835

  Fly   834 LRRQIALPFRKPLILCTPKSLLRHPEAKSPFSEMSEGSEFQRIIPDNGPAGQNPSNVKKVVFCSG 898
            |||||.||||||||:.|||||||||||||.|.:|:.|:.|||:||:||.|..||..||:|:||:|
 Frog   836 LRRQILLPFRKPLIIFTPKSLLRHPEAKSSFDDMNTGTNFQRVIPENGAASHNPQAVKRVIFCTG 900

  Fly   899 RVYYDLTKTRREKQLEGEIAIVRVEQISPFPFDLVKEQANLYKNAELVWAQEEHKNQGSWTYVQP 963
            ::||:|.|.|..|.|:.::||.|:||:|||||||||::|..|..:||||.||||||.|.:.||:.
 Frog   901 KIYYELVKERHNKGLDNQVAITRLEQLSPFPFDLVKQEAEKYATSELVWCQEEHKNMGYYDYVKA 965

  Fly   964 RFLTALNHSRDV 975
            ||||.|||:|.|
 Frog   966 RFLTILNHARPV 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nc73EFNP_001097629.1 2-oxogl_dehyd_N 51..86 CDD:292696 22/34 (65%)
sucA 53..1104 CDD:236499 599/940 (64%)
TPP_E1_OGDC_like 259..521 CDD:238974 208/262 (79%)
Transket_pyr 645..856 CDD:280874 159/210 (76%)
OxoGdeHyase_C 863..1102 CDD:293475 64/113 (57%)
ogdhlXP_002933951.2 sucA 34..1009 CDD:236499 604/950 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 487 1.000 Domainoid score I387
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1222 1.000 Inparanoid score I190
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D134699at2759
OrthoFinder 1 1.000 - - FOG0000624
OrthoInspector 1 1.000 - - otm48897
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R861
SonicParanoid 1 1.000 - - X894
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.090

Return to query results.
Submit another query.