DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpr73D and frm

DIOPT Version :9

Sequence 1:NP_001097627.1 Gene:Cpr73D / 39897 FlyBaseID:FBgn0036680 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001137887.1 Gene:frm / 38624 FlyBaseID:FBgn0035612 Length:1180 Species:Drosophila melanogaster


Alignment Length:607 Identity:141/607 - (23%)
Similarity:185/607 - (30%) Gaps:210/607 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLLLCAVLGYFSDPARAEI------------EYNTISEDGSFQFRHANDDIGGYYHSASGTPDNT 63
            :.|.|.....|.:..|..|            .|::..:..::::.:.....|.::|...| ||..
  Fly    13 IFLQCVYSAKFDEQNRRLILDIDDQKTTNRQYYSSNIDTNAYRYGYDVGKTGNFHHETRG-PDGV 76

  Fly    64 VRGRYGSRSPASGQIEETVYTAGPRGFRVNGPKIHRKMDLAQYPVLPRGSPDDPLADPFDDPSYS 128
            ..|.||...|.. .:..|.|.|...|:|...|                           :.|..:
  Fly    77 TYGCYGLIDPYH-LLRATHYVADAHGYRTVEP---------------------------EKPVET 113

  Fly   129 FSFRTPDQSRSEENDSGNRIRGLYSYLDDVGERHSVRYAAGAGTGFEISNAVPDSPSVVAYSSPL 193
            |    |....||                                    :|..|..|.:|.....|
  Fly   114 F----PPHLYSE------------------------------------TNGGPSEPGIVLQWEEL 138

  Fly   194 YTSHPKARGKMS--VQRG----------PAGSYKLIAS---------GSDHRRAESRAPDG--LV 235
            |  .|...||.:  .|.|          ..||...|.|         |||.:......|.|  :.
  Fly   139 Y--FPIGCGKFANGAQHGVPFFLDDFKNKGGSNDAIPSFSANTIVIKGSDQKSLPIHKPTGPLVP 201

  Fly   236 RGTYSFLDDKGVQRTVEYIAGAGIGYRVVQNRIGPGTHN--------NPSVADFRLTDPDFRLAN 292
            :||..|..||| ...:.:.......:..| |.:.||::|        ||.|   .:..|:.....
  Fly   202 QGTGIFGTDKG-HSDLSHPGDQAPSFHSV-NTLLPGSNNDGQYVPDSNPYV---HVIGPNGGNGG 261

  Fly   293 DFGRGAGGGLGPKGGGGGSGGGSVSVGASGPSGGAGGAGRGRTPSRPGGKDYLKPADGARDRNRG 357
            :.|.|:|||.|..||.||.||...: |..||:|..|..|....|..|||.               
  Fly   262 NGGSGSGGGFGGNGGFGGVGGFGPN-GPGGPNGPKGPKGPPGPPGPPGGL--------------- 310

  Fly   358 DGDAGAADENLGHHADDQGDDIGLGSSSSGSTNFNGKEDRRGFPAGSPQRGSTRYDAGGDSSQRG 422
             |..||.....|......||..|||..|.     ||..||.....|.......||.:|..    |
  Fly   311 -GPVGAGGGASGKPVYKDGDRTGLGDGSG-----NGSGDRISTGNGGGAGAGDRYISGNG----G 365

  Fly   423 GSGSSTRNNVSGSRNRNRFGGVGGVSVSSERGAGRGGAAGGG-----------SSRRGGGAGASR 476
            |.|:..| .|:|:.        |||........|.|||||.|           ::..||..|..|
  Fly   366 GVGAGDR-YVTGNG--------GGVGAGDRYTTGNGGAAGSGDRYTAGNGGRYNTGNGGAVGGDR 421

  Fly   477 EGD---SGLG------YLPPTGGSGTSA--------------------MSGPGDNYH-LND---- 507
            .|.   ||.|      |.|...|:.||.                    .:|.|..|: :||    
  Fly   422 TGTGAASGFGIEASGQYRPDNEGTYTSTYTHTETGFPGAIPYTPDNGKYNGNGGRYNGINDGRYY 486

  Fly   508 -DD----------VGSSLPPLV 518
             ||          .|...||.|
  Fly   487 HDDSGKYVHVEGPTGPPAPPYV 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr73DNP_001097627.1 Chitin_bind_4 127..174 CDD:278791 4/46 (9%)
Chitin_bind_4 <223..257 CDD:278791 8/35 (23%)
frmNP_001137887.1 Chitin_bind_4 54..102 CDD:278791 12/49 (24%)
MttA_Hcf106 <1046..1128 CDD:294511
L12 1051..1159 CDD:273301
HHH_5 1092..>1168 CDD:304555
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.