DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lmpt and RP1

DIOPT Version :9

Sequence 1:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster
Sequence 2:XP_016869210.1 Gene:RP1 / 6101 HGNCID:10263 Length:2163 Species:Homo sapiens


Alignment Length:2180 Identity:386/2180 - (17%)
Similarity:694/2180 - (31%) Gaps:794/2180 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 QLQASHSKEEADEYAGMEPVVEELCVKKVAPPRFQEPPEEPMVHKVKTQFGQGSGPE-------- 415
            |:.|..|...:..::.:.|...|   .:|.|||... ...|:|.| :..|.:...|:        
Human     3 QVSAKMSDTPSTGFSIIHPTSSE---GQVPPPRHLS-LTHPVVAK-RISFYKSGDPQFGGVRVVV 62

  Fly   416 DAYSAKSKTLTFPGVSDEGSSLEPKTPFSIQQSSFSTQPSDEGNRIESERPEPEGEDQI---QEV 477
            :..|.||    |..:.|..|...| .||.::..|                 .|.|...|   :|:
Human    63 NPRSFKS----FDALLDNLSRKVP-LPFGVRNIS-----------------TPRGRHSITRLEEL 105

  Fly   478 QYTEDYLRS---------LDGIKNRP----------------------------------LMRED 499
            :..|.||.|         ||..:.||                                  ....|
Human   106 EDGESYLCSHGRKVQPVDLDKARRRPRPWLSSRAISAHSPPHPVAVAAPGMPRPPRSLVVFRNGD 170

  Fly   500 GSGRRRAFKKRRSSGSSNSSRE--SRASRDEELKMFT-------SLEEEELRHG-----DREDYN 550
            ...||.....||.:.|..:..:  :...:...:|::.       ||:...|..|     .||.:.
Human   171 PKTRRAVLLSRRVTQSFEAFLQHLTEVMQRPVVKLYATDGRRVPSLQAVILSSGAVVAAGREPFK 235

  Fly   551 P-----IKYTSEPTLRVKSHRRHKRSPAK------DVRPTAESTTSLEMLGEESTNPWGEVVPEH 604
            |     .||.....|...|.|.:.:..||      ....::.|.:.:..:..|.|:.     .:.
Human   236 PGNYDIQKYLLPARLPGISQRVYPKGNAKSESRKISTHMSSSSRSQIYSVSSEKTHN-----NDC 295

  Fly   605 YKDTEFWKREKALSIDEEEIELER---------PSRGEDVEEEATNEPKSSSFEEATEAQNEQAV 660
            |.|..|        :.|:.:.||:         ||. :|:|       ||..|       |:...
Human   296 YLDYSF--------VPEKYLALEKNDSQNLPIYPSE-DDIE-------KSIIF-------NQDGT 337

  Fly   661 AALKQQLSKEQLDKEAEKDNPQAVDTSDSN---KSNLQTSIAAEEQSRGGSPGLRRSPRMDEMEH 722
            ..::.::.....::|..|.......|..||   ||.:  |.....:||  |.||:.:......:.
Human   338 MTVEMKVRFRIKEEETIKWTTTVSKTGPSNNDEKSEM--SFPGRTESR--SSGLKLAACSFSADV 398

  Fly   723 YPERWSASQEQQSVQQQPPRTAPAINVQQPD-------TAPWR------DQYGLLMEGLSD---- 770
            .|...|::||....::        ||:|..|       :|.|.      |    :::|..|    
Human   399 SPMERSSNQEGSLAEE--------INIQMTDQVAETCSSASWENATVDTD----IIQGTQDQAKH 451

  Fly   771 -FYDFTASVNPSRSRSASRNPSPAPKNVANLMDGDTERSLEVYDDTQEGVMAGELNCESVLQLLE 834
             ||               |.|:|..:.|..........:|....:.|| .|.|:.   |..:..|
Human   452 RFY---------------RPPTPGLRRVRQKKSVIGSVTLVSETEVQE-KMIGQF---SYSEERE 497

  Fly   835 SNLNETE---STNDQLQVQTVADDARDGKSILPMV--HEPLESSALGAVLEERGREPSVGRIQSR 894
            |..|::|   .|:...::.:|::     |.:|..:  ::.:|.|:|     ||.:|.|:  ::|.
Human   498 SGENKSEYHMFTHSCSKMSSVSN-----KPVLVQINNNDQMEESSL-----ERKKENSL--LKSS 550

  Fly   895 SRSRSRSPLPTSENLEKSIHKRRERLIKQNDELAERLSHSS--PEDSMEIETSD----------- 946
            :.|.....:.:.:.||.|          .|:.|...:|::|  .||.::....|           
Human   551 AISAGVIEITSQKMLEMS----------HNNGLPSTISNNSIVEEDVVDCVVLDNKTGIKNFKTY 605

  Fly   947 ---NGRLSPTLEVTLPQPVIEIN------EMADEPMEDAETT--------------------PEE 982
               |.|.||   ::........|      .:::.|..:|.:|                    |:.
Human   606 GNTNDRFSP---ISADATHFSSNNSGTDKNISEAPASEASSTVTARIDRLINEFAQCGLTKLPKN 667

  Fly   983 MRLFVETLRAERNARSRSRS-RSR---SPLPTAGNIEKSLESRRLKRIQHNDEIFEKLHDQMSSP 1043
            .:..:.::.:::..:||.:: .||   ..|.|.|.:.|:      :||.....|         :.
Human   668 EKKILSSVASKKKKKSRQQAINSRYQDGQLATKGILNKN------ERINTKGRI---------TK 717

  Fly  1044 QIIIESASPPSLPLPLPTISIEIAEPPEENASHTEAEPEDTPESMARLFEQLRLNRVRS------ 1102
            ::|::.:..|.....|....::.::...|  |:|.....:...::::.|.:.:||..::      
Human   718 EMIVQDSDSPLKGGILCEEDLQKSDTVIE--SNTFCSKSNLNSTISKNFHRNKLNTTQNSKVQGL 780

  Fly  1103 ----HSRSRSRSPLPTPANLEQSVQKRRERLIAQNDQFFEVLQERARTPEPETRL---TVE---- 1156
                .|||.::..|..|        |:||  |.|.|:.|         |..|::.   |.|    
Human   781 LTKRKSRSLNKISLGAP--------KKRE--IGQRDKVF---------PHNESKYCKSTFENKSL 826

  Fly  1157 -YVYEYVQEKDEQVGEGRDKRSLSPSRSRSQSQEKALD---DFHLMLNLEGSELRTLRKNSEELE 1217
             :|:..:::|.:.....:.:..::....|..:::..:.   |.|:       .|::.:|...:..
Human   827 FHVFNILEQKPKDFYAPQSQAEVASGYLRGMAKKSLVSKVTDSHI-------TLKSQKKRKGDKV 884

  Fly  1218 SVLAVGAKQ----REVDMDALEK-------------------LHNANEEIELRVL--SPTNSELE 1257
            ...|:.:||    |...:.:|:|                   |.|.|....|:.:  :|......
Human   885 KASAILSKQHATTRANSLASLKKPDFPEAIAHHSIQNYIQSWLQNINPYPTLKPIKSAPVCRNET 949

  Fly  1258 RVVEMTREN-----------------PDMDRTVSEVARDLQDELMASGFKRSTYVGESLDLGSDQ 1305
            .||..:..:                 .:.::.::::|....|.|...|.|  :::..  |.|.:.
Human   950 SVVNCSNNSFSGNDPHTNSGKISNFVMESNKHITKIAGLTGDNLCKEGDK--SFIAN--DTGEED 1010

  Fly  1306 FKELRREAAQFQRSRSPSPGSSMDY----AREQAAAQRELQTAILDSLTESRLGAKPKTYSEERT 1366
            ..|.:             .||..|.    ..|.....   |:||.|..|:|.:.|:..  ..|:.
Human  1011 LHETQ-------------VGSLNDAYLVPLHEHCTLS---QSAINDHNTKSHIAAEKS--GPEKK 1057

  Fly  1367 GEFEDISAAQLDDLRHRTAEFQRSRSQSRSPLREVELTQLRDIEAESAKRELQDQLLDRLAASSI 1431
            ..:::|:.|             |.|....:.:      |:..||.|:.|..|...:|.:|.||  
Human  1058 LVYQEINLA-------------RKRQSVEAAI------QVDPIEEETPKDLLPVLMLHQLQAS-- 1101

  Fly  1432 NFENFSRHLNADFLDSERRASDSALM--GDMEPDEYHHFRRYSLAQEQPVEEYPSDDYVYISQIE 1494
                         :....:..:..:.  |.:....:|.    ::..        |...:.::.:.
Human  1102 -------------VPGIHKTQNGVVQMPGSLAGVPFHS----AICN--------SSTNLLLAWLL 1141

  Fly  1495 VRTLTGT-RTWLKEDFYTHEPNDFSDSKSPVRDEDSWARAVLAAEAEAAEFDSTNAIYSYDIVGD 1558
            |..|.|: .::.:.|  .|:..:.|.....:.:       :|...|...|.|...|..:      
Human  1142 VLNLKGSMNSFCQVD--AHKATNKSSETLALLE-------ILKHIAITEEADDLKAAVA------ 1191

  Fly  1559 HENLDQERSSSNDSEDTRQTVVEIDDEDEFEFELDEGIS----------DNNERTQPTDESHHDT 1613
              ||.:..:|.....:..|.:|.||        |....|          ..|||||.........
Human  1192 --NLVESTTSHFGLSEKEQDMVPID--------LSANCSTVNIQSVPKCSENERTQGISSLDGGC 1246

  Fly  1614 SECEEAERNADRYE-----------NRGAQDWEEVDDVEDFL---DYGFDDGAVGGATPYSDPDS 1664
            |..|.........|           |:.....|..:..:.|.   .||.|..::..|....:..|
Human  1247 SASEACAPEVCVLEVTCSPCEMCTVNKAYSPKETCNPSDTFFPSDGYGVDQTSMNKACFLGEVCS 1311

  Fly  1665 FIEQIYNEAIKNRKQSGILREYE---TIVQEQLPSDLSE-----SEKEKSGSDSEKYALWAKTRE 1721
            ..:.::::....:|::   ..||   .|.:..:|.::..     :.||.:.:|:     ...|.|
Human  1312 LTDTVFSDKACAQKEN---HTYEGACPIDETYVPVNVCNTIDFLNSKENTYTDN-----LDSTEE 1368

  Fly  1722 LERSHSGTRHSDVDIALGLIPESDHRDSEMRYLGDAHVVARQSTRLRTRYGFNPKL---EVGDL- 1782
            |||.      .|:...|.::.:.::::                       |||..:   .|.:| 
Human  1369 LERG------DDIQKDLNILTDPEYKN-----------------------GFNTLVSHQNVSNLS 1404

  Fly  1783 -------EDDIEVDLNYKPKREYNWRKNFRLDDNEEGERSVQVKTEEDEEQEARDQFEEEFGWQD 1840
                   |.:.|:|           :|:..|||.|    :..::..:||........||.     
Human  1405 SCGLCLSEKEAELD-----------KKHSSLDDFE----NCSLRKFQDENAYTSFDMEEP----- 1449

  Fly  1841 REQELEEELYQDHEQP------LYANEEN-GEIENVELLENRRISL------GGESITLFSRSPV 1892
                      :..|:|      :.::|.| .|:|:.|.|||....:      |||..|       
Human  1450 ----------RTSEEPGSITNSMTSSERNISELESFEELENHDTDIFNTVVNGGEQAT------- 1497

  Fly  1893 REILPDVPEELPQEEEALEEQPEAVAPLE-------DLPAEK----------------------- 1927
                          ||.::|:.||...||       ::..||                       
Human  1498 --------------EELIQEEVEASKTLELIDISSKNIMEEKRMNGIIYEIISKRLATPPSLDFC 1548

  Fly  1928 -PKKKKSKKKLRKGS--------KTEE------------------------ELRDDNDSDTQMGS 1959
             ..|:.|:|:..:|.        ||.|                        :.|.|:||:....:
Human  1549 YDSKQNSEKETNEGETKMVKMMVKTMETGSYSESSPDLKKCIKSPVTSDWSDYRPDSDSEQPYKT 1613

  Fly  1960 SRRSDDQEPTDP-------------------------------------------PKRKTRSRRS 1981
            |  |||  |.|.                                           |......:.|
Human  1614 S--SDD--PNDSGELTQEKEYNIGFVKRAIEKLYGKADIIKPSFFPGSTRKSQVCPYNSVEFQCS 1674

  Fly  1982 SRSSLTNEEPN--GGSGPFSPRSSLAFVGESLEGIAEFEPQEREE-----------------EQS 2027
            .::||.:.|..  |.|...|..||:         :.||: :||::                 |..
Human  1675 RKASLYDSEGQSFGSSEQVSSSSSM---------LQEFQ-EERQDKCDVSAVRDNYCRGDIVEPG 1729

  Fly  2028 TKKRTKKRKKTSTKE----------CKE------EAKEETQTQAIDDSQLDRALAAALAEIAPVS 2076
            ||:....|..|..:|          .||      .::........|.:.:|..|....:|: |.|
Human  1730 TKQNDDSRILTDIEEGVLIDKGKWLLKENHLLRMSSENPGMCGNADTTSVDTLLDNNSSEV-PYS 1793

  Fly  2077 VSTNLTPESTHQNLLSTISTGQSVCITPASSIEEI 2111
            ...||.|..|...|.|             |.:||:
Human  1794 HFGNLAPGPTMDELSS-------------SELEEL 1815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LmptNP_996113.2 GBP_C <103..201 CDD:303769
ARGLU 110..255 CDD:291991
coiled coil 170..181 CDD:293879
coiled coil 190..201 CDD:293879
RP1XP_016869210.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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