DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lmpt and CG1647

DIOPT Version :10

Sequence 1:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster
Sequence 2:NP_651636.1 Gene:CG1647 / 43401 FlyBaseID:FBgn0039602 Length:1222 Species:Drosophila melanogaster


Alignment Length:1373 Identity:260/1373 - (18%)
Similarity:447/1373 - (32%) Gaps:400/1373 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   614 EKALSIDEEEI-ELERP------SRGEDVEEEATNEPKSSSFEEATEAQNEQAVAALKQQLSKEQ 671
            |.|..||.:.| :.|||      .||...:.| .:.||:::.:  .:.:.|..|...||:|...|
  Fly   106 EPARLIDLKRIVKEERPISGAVGKRGRKRKGE-ESWPKNNNVK--PQVKKESFVWHKKQKLQPSQ 167

  Fly   672 L-----DKEAE-KDNPQAVDTS-------DSNKS--------NLQTSIAAEEQSRGGSPGLRRSP 715
            :     .:|.| ||.|...|||       ...||        .|...:|.|.:|....|.:   |
  Fly   168 ITSLVSKREPEIKDEPAEQDTSLKGPPKKAGRKSICSVCGEKFLSKELADEHKSLVHVPSI---P 229

  Fly   716 R-----MDEMEHYPERWSASQEQQSVQQQPPRTAPAINVQQPDTAPWRDQYGLLMEGLSDFYDFT 775
            |     .::..|......|.|....:.:.|.:..                  |....:::.|.||
  Fly   230 RYICNACNQTHHNQSDIRAHQLWHKLSKTPYKCP------------------LCESSVANAYAFT 276

  Fly   776 ASVNPSRSRSASRNPSPAPKNVANLMD----------------------------GDTERSLEVY 812
                    |....:..|.|..:. ::|                            |...|:|   
  Fly   277 --------RHLREHTPPTPVQLL-VLDRECPLCKKTFVTNFFYNTHRCAIRKRKCGGCSRTL--- 329

  Fly   813 DDTQEGVMAGELNCESVLQLLESNLNETESTNDQLQVQTVADDARDGKSILPMVHEPLESSALGA 877
             :|:...|.....|..:.      ||.::    .:..|.|.::|:      .::...:|...||.
  Fly   330 -NTEAAYMRHAPTCPKIY------LNHSK----HIMPQVVTNEAQ------MLIKNEIEEELLGL 377

  Fly   878 ----------VLEERGREPSVGRIQSRSRSRSRSPLPTS----ENLEKSIHKRRERL-----IKQ 923
                      |::| |.:|.|      ...|..|||..|    :.|..:..|..:|:     :|:
  Fly   378 PPATTVPPDFVIDE-GMQPVV------VLERLSSPLLRSSSGTDQLVAAKSKNSDRVSARNYLKR 435

  Fly   924 NDELAERLSHSSPEDSMEIETSDNGRLSPTLEVTLPQPVIEINEMADEPMEDAETTPEEMRLFVE 988
            .|:|.:...:                   ||.....:|.:.||: ...|...||:.||       
  Fly   436 VDQLLKNTIN-------------------TLVSIKHEPEVHIND-TGPPRGQAESDPE------- 473

  Fly   989 TLRAERNARSRSRSRSRSPLPTAG-NIEKSLESRRLKRIQHNDEIFEKLHDQMSSPQIIIESASP 1052
               .|||...          |:.| :|:.:           |||. ::...:..|.:|.:.:.. 
  Fly   474 ---PERNEEH----------PSFGDDIQAA-----------NDEC-QECQPETESDKISVAACD- 512

  Fly  1053 PSLPLPLPTISIEIAEPPE----ENASHTEAEP-------------------EDTPESMARLFEQ 1094
                 .:|::|::  :.||    |..:..:.||                   :|..|:.......
  Fly   513 -----DIPSVSVK--QEPEYDGYEKQTGVKQEPLKLKLKITKNHGKLNSSLIDDLDEAGQAFGRS 570

  Fly  1095 LRLNRVRSHSRSRSRSPLPTPANLEQSVQKRRERLIAQNDQFFEVLQERARTPEPETRLTVEYVY 1159
            .:..:.|.| :.|.:         |.|.:....|..:||....::.||........|.:|...:.
  Fly   571 SKKKKKRKH-KEREK---------EASNETENCRTESQNQPAIKIKQEPVDYAPEATVMTTIPMT 625

  Fly  1160 EYVQEKDEQVGEGRDKRSLSPSRSRSQSQEKALDDFHLMLNLEGSELRTLRKNSEELESVLAVGA 1224
            ::....:|      .:||.....:..||||                  .::.|..||:.::.:..
  Fly   626 QFESSLNE------SERSEEVDEAMIQSQE------------------DVKPNRMELDRMMQISN 666

  Fly  1225 KQREVDMD----ALEKLHNANEEIELRVLSPTNSELERV---VEMTRENPDMDRTVSEVARDLQD 1282
            ....|||.    |||:...|..|..|..:....|...:.   .|....:|....|:.::...:..
  Fly   667 VTSGVDMAEEAMALERAEEACPEDSLHKVKSVKSTARKSTGGAERKTYSPPRTNTLPQIVAVVSG 731

  Fly  1283 ELMASGFKRSTYVGESLDLG-SDQFKELRREAAQ------FQRSRSPSPGSSMDYAREQAAAQRE 1340
            |   |.|...:...|..:|| .|:..|.:||..:      .........| |:|.:......:||
  Fly   732 E---SAFNMISIKPEPRNLGYGDEEPEDQRETTEEINHNDMMEEEKEYIG-SLDLSDVSVKQERE 792

  Fly  1341 LQTAILDSLTESRLGAKPKTYSEERTGEFEDISAAQLDDLRHRTAEFQRSRSQSRSPLREVELTQ 1405
            |....:|::..:.|     ..|:|...:..:.||:..|:     ||....|.......||:||..
  Fly   793 LDICEIDAVHRNGL-----EKSDEDDDDGNEDSASSADE-----AEEAMERDTEERIYREIELPP 847

  Fly  1406 LRDIEAESAKRELQDQLLDRLAASSINFENFSRHLNADFLDSERRASDSALMGDMEPDEYHHFRR 1470
            | :::.||::::|:.:.:|...::::.             .||..:....::| :|..|...|..
  Fly   848 L-ELQNESSRKDLESERMDTEVSTALP-------------ASETPSQTRDVLG-VEKSEASAFSL 897

  Fly  1471 Y-----SLAQEQPVEEYPSDDYVYISQIEVRTLTGTRTWLKEDFYTHEPNDFS--DSKSPVRDED 1528
            .     |.|..||.....:|       ||........|       |:||:..:  :.:||..|..
  Fly   898 VITNICSQAVPQPSAACSND-------IECSIGPSPST-------TNEPHSHTVENVQSPANDLQ 948

  Fly  1529 SWARAVLAAEAEAAEFDSTNAIYSYDIVGDHENLDQERSSSNDSEDTRQTVVEIDDEDEFEFELD 1593
            :.|:..:||:::.                |...:.|..:||....||:...........|     
  Fly   949 TSAQVAIAAQSQP----------------DPCIVSQPAASSESQADTKDLPPAASQIQTF----- 992

  Fly  1594 EGISDNNERTQPTDESH-HDTSECEEAERNADRYENRGAQDWEEVDDVEDFLDYGFDDGAVGGAT 1657
                  |..:.|.   | |..:|....|.:|...|:|...|.:....                  
  Fly   993 ------NTESLPI---HVHSETEDNSIENDASYLESRAQVDCQSAGT------------------ 1030

  Fly  1658 PYSDPDSFIEQIYNEAIKNRKQSGILREYETIVQEQLPSDLSESEKEKSGSDSEKYALWAKTREL 1722
              .:|...:||  ||::.:......:.|..:........|.|||..:...:....|.|...:.:.
  Fly  1031 --ENPSVVLEQ--NESLPSGSCVSPIPENPSPGNSPPQHDESESLDKPEMAAGSAYCLATVSLDA 1091

  Fly  1723 ERSHSGTRHSDVDIALGLIPESDHRDSEMRYLGDA-------HVVARQSTRLRTRYGFNPKLEVG 1780
            .:        |.: ||.| |..|....:..|..|.       |.::.|...:..........|..
  Fly  1092 PK--------DTE-ALAL-PPCDAAIIDSNYTSDEEQQNVLNHELSEQQLAIMEHRQLLVHEEQP 1146

  Fly  1781 DLEDDIEVDLNYKPKREYNWRKNFRLDDNEEGERSVQVKTEEDEEQEARDQFE-EEFGWQDREQE 1844
            .|.:.|...|:.:|..|...|.|.:..|.|:||       |.....:|.|... .|....:....
  Fly  1147 ALLEVIPPGLSSRPIEETENRINEQQQDLEQGE-------ERPPRFQANDDSNINEIAENNNNAN 1204

  Fly  1845 LEEELYQD 1852
            :|.||..|
  Fly  1205 IERELQDD 1212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LmptNP_996113.2 Smc <101..>371 CDD:440809
PTZ00121 <105..689 CDD:173412 27/94 (29%)
CG1647NP_651636.1 zf-AD 19..95 CDD:214871
C2H2 Zn finger 203..224 CDD:275368 4/20 (20%)
C2H2 Zn finger 233..253 CDD:275368 3/19 (16%)
C2H2 Zn finger 262..282 CDD:275368 5/45 (11%)
C2H2 Zn finger 297..314 CDD:275368 0/16 (0%)
Blue background indicates that the domain is not in the aligned region.

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