DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lmpt and tnc

DIOPT Version :9

Sequence 1:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster
Sequence 2:NP_001247300.1 Gene:tnc / 42990 FlyBaseID:FBgn0039257 Length:2819 Species:Drosophila melanogaster


Alignment Length:2425 Identity:460/2425 - (18%)
Similarity:804/2425 - (33%) Gaps:735/2425 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PGDSSVDAAADAEELPRM-----------RERLDKQIKEAAE------REALAGT-------NVM 83
            |.:||.:|:.:.|::.:.           .|.:.|....|.|      .|.:.||       :..
  Fly   601 PTESSEEASGEGEDVAKETTPAGEASIAGEEEIVKGTTPAGEPSSEGDEEIVKGTTPAEESSSES 665

  Fly    84 QDGVLYVNGIRVDPAGDKRQALAAELARQQ---------------QIEADTRRQLAEAEAKLVEE 133
            :|.:..|    ..|||:...|...|:|::.               ::...........|.::|:.
  Fly   666 EDELTKV----TTPAGEPSVAGEEEIAKETTPAGEPSIAGEEEIVKVTTPAGESSIAGEEEIVKV 726

  Fly   134 RLRVQREKEESEEQQRKLVEAERQREREQAEKELQEQREAERRQLEAEENQRKQRENEEKERLEN 198
            .........|.||:..|:.....:...|..|:.::|...|.....|.||:..|...:..|..:|.
  Fly   727 TTPAGESSSEGEEEIIKVTTPAGESSSEGDEEIVKESTPAGEPISEGEEDVIKATTSAPKSDIEG 791

  Fly   199 ERR---------------------LIDAERE--------------REENERRL--QEAEEQRERE 226
            .:.                     :.:||.|              .||..:..  |..|||.|..
  Fly   792 VKEPETATEVPAEEVEDFAKPTTPIAEAEEEPIAGTPIPTDGISGEEEIVKGTTPQTLEEQPEIS 856

  Fly   227 ESERRIVVAE---RQREQAEAEKERAEQQRILAEAEAAQAERRLFDAE-----IQRERDQADEEG 283
            |....:.|||   .....|.|.....|..:..|....:.|..|..|.:     :...:|:.|||.
  Fly   857 EESTEVPVAEDDLSSSTSASAIASSTEGVQDAASETTSSAPARAGDKDEAATTVPTAQDKDDEEV 921

  Fly   284 QALRDA------EIVERLLAAERELSPSATESELEEDAAIAEQSRRLISSRTDLEQKQRMIEENA 342
            :  :||      ::|:...|     ..:.||...||.:..||.:...:::.:..::::....|.|
  Fly   922 E--QDATDLPVEDVVQSTTA-----KTTTTEQPKEESSTEAEDAEIEVTTSSPADKQEVPEAEPA 979

  Fly   343 RRFLEAEEEMVMLQQRQLQASHSKEEADEYA--GMEPVVEELCVKKVAPPRFQEPPEEPMVHKVK 405
            .:..:.||::.......:::.......|..|  |.....:|....|  ||....||         
  Fly   980 DKDHKDEEDVQTATDLPIKSDIGPPVVDTEATTGQPETSDETATDK--PPSVYLPP--------- 1033

  Fly   406 TQFGQGSGPEDAYSAKSKTLTFPGVSDEGSSLEPKTPFSIQQSSFSTQPSDEGNRIESERP--EP 468
                  .|.:|.......|.|.|.|.:|.|.....:|.| |:...||...|..|..|:|:|  .|
  Fly  1034 ------GGEKDTEKEDETTATEPSVQEEPSKPVDISPVS-QEVPSSTAKVDNRNDFETEKPTLPP 1091

  Fly   469 EGEDQIQEVQYTEDYLRSLDG----------IKNRPLMREDG----------------------- 500
            .||||..|.....|....:.|          ..|..::....                       
  Fly  1092 SGEDQSSEPLPAMDLPAGIPGEGDCLVEGKTYANNTIVPATAPCDVSCKCISSLVACQQMECKLP 1156

  Fly   501 -------------SGRRRAFKKRRSSGSSNSSRESRASRDEELK----------------MFTSL 536
                         .|....:....|:.|:....||.|..|.::.                |.|.:
  Fly  1157 ENLEKCTVAADLLDGCCPTYICDESTESAEKDEESTAKPDNKIDEDVSEISTEEIPKDVIMPTGI 1221

  Fly   537 EEEELRH-GDREDYNPIKYTSEP-----TLRVKSHRRHKRSPAKDVRPTAESTTSLEML--GEES 593
            .|:.|.| ...|:..|:  ||.|     :...|..::.....|:|.:|..||....:.:  .||.
  Fly  1222 TEQPLSHVKPDEEIQPV--TSVPAQFDESTTAKVDKKPIDESAEDKKPIGESEEDSKPIDESEED 1284

  Fly   594 TNPWGEVVPEH--YKDTEFWKREKALSIDEEEIELERPSRGEDVEE-EA-----TNEPKSSS--- 647
            ..|..|...:.  .:|:|  ::||.|.......|:|:.|:.||.:: ||     |.:|::::   
  Fly  1285 KKPVEESAEDKKPVEDSE--EKEKPLPTVIPASEIEKESKPEDEKKTEADFAAPTEQPEATTPAQ 1347

  Fly   648 FEEATEAQNEQAVAALKQQLSKE--------------------------------------QLDK 674
            ..:..|.:.:..:|.....:|.|                                      .|||
  Fly  1348 IADTAEKEVDDKLATTSAPVSGEDELKPADEKKRTETAQIPDAEIPASTDEPESSTELPTVDLDK 1412

  Fly   675 EAEKDNPQAVDTSDSNK-SNLQTSIAAEEQ-------SRGGSPGLRRS----PRMDE------ME 721
            :.|:|:.:..:..:|:| ..:.||.:.|.:       :....|.:..|    |..:|      .|
  Fly  1413 KPEEDSTKGTEAPESDKVPEVPTSASTENEIEESDKFTTVAPPKISASDETEPTAEEDLVPATFE 1477

  Fly   722 HYPERWSASQEQQSVQQQP-PRTAPAINVQQPDTAPWRDQYGLLMEGLSDFYDFTASVNPSRSRS 785
            .....:..|.::.:||..| |..|||...::|..|....:..:..|..:: .:..||...|.|.:
  Fly  1478 PIESEFEVSTKKPAVQGPPLPTLAPAQPEKKPVDAETSTEADISTEPSAE-VEKEASGETSESDN 1541

  Fly   786 ---ASRNPSPAPKNVANLMDGDTERSLEVYDD-TQEGVMAGELNCESVLQLLESNLNETESTNDQ 846
               |..:.:|.|.:........||:::|..|. |....:||:.. ||.|..|..::.|.|:   .
  Fly  1542 EIDAGASSTPVPVSADEDKTPSTEKTVEADDKFTTVAPLAGDEE-ESNLPKLPQDIFEEEA---P 1602

  Fly   847 LQVQTVADDARDGKSILPMVHEPLESSALGAVLEERGREPSVGRIQSRSRSRSRSPLPTSENLEK 911
            :.|.|.|....||:      .:|:|       :||:..|.....|:..:.:      |||...|.
  Fly  1603 VAVTTAAPSKDDGE------QKPVE-------VEEKPIEDGQKPIEDETST------PTSSENEI 1648

  Fly   912 SIHKRRERLIKQNDELAERLSHSSP------EDSMEIETSDNGRLSPTLEVTLPQPVIEINEMAD 970
            .....|...|..:.|.....|..:|      |.|.:...||..:.:|..||  |..|..    |.
  Fly  1649 EPESDRATTIAPSKEEPSEPSTGAPTKDEPAEPSTDAPESDESKETPESEV--PTTVAP----AG 1707

  Fly   971 EPMEDAETTPEEMRLFVETLRAERNARSRSRSRSRSPLPTAGNIEKSLESRRLKRIQHNDEIFEK 1035
            |.:..:..||:|                       .|..|:..:.|                   
  Fly  1708 EKIPTSSITPDE-----------------------EPTATSAPVAK------------------- 1730

  Fly  1036 LHDQMSSPQIIIESASPPSLPLPLPTISIEIAEPPEENASHTEAE---PEDTPESMARLFEQLRL 1097
                   |...:|..:...:|...|..|.|     :||:|..:..   ||..||:.|:..|:   
  Fly  1731 -------PDEDVEKETSTEIPTDAPASSEE-----DENSSTDQIPSEVPEKKPETPAQTPEE--- 1780

  Fly  1098 NRVRSHSRSRSRSPLPTPANLEQSVQKRRERLIAQNDQ---FFEVLQERARTPEPETRLTVEYVY 1159
                  ......:..||.::....||:..|.::|:..|   ...:.|:...|..|.......||.
  Fly  1781 ------GDIVGATAAPTTSDEVPPVQRLPEEVLAEIPQPSTETGIKQQDETTAAPSIDRKEPYVT 1839

  Fly  1160 EY---------VQEKDEQVGEGR---DKRSLSPSRSRSQSQEKALD---DFHLMLNLEGSELRTL 1209
            |.         :.||||:..|..   :::......|..:.:||.::   .....::.|.||..: 
  Fly  1840 EIDEEATTVAPISEKDEKPTEEEKPVEQKPTGEEPSEEEEKEKPIEQDVSTEGPVSTEASEAGS- 1903

  Fly  1210 RKNSEELESVLAVGAKQREVDMDALEKLHNANEEIELRVLSPTNSELERVVEMTRENP--DMDRT 1272
            .::|||::.     :.:.||          |.:..:.:..|...:.:|.:.|::.|.|  |.|:.
  Fly  1904 TESSEEVKP-----STEGEV----------AEKPEDKQPSSTAQAPVETIPEISTELPAQDGDKP 1953

  Fly  1273 VSEVARDLQDELMA-SGFKRSTYVGESLDLGSDQFKELRREAAQFQRSRSPSPGSSMDYAREQAA 1336
            .||...|..::..| |..|..:..||.::                        |..:..|..|||
  Fly  1954 TSEAPVDSDEDTSAPSDEKIPSVSGEEVE------------------------GPEVTTASPQAA 1994

  Fly  1337 AQRELQTAILDSLTESRLGAKPKTYSEERTGEFEDISAAQLDDLRHRTAEFQRSRSQSRSPLREV 1401
            .:.||:|.           |:.:..|.::..|                .|:|:...::::.....
  Fly  1995 EEDELKTP-----------AESEPSSTDKVPE----------------TEYQKPEDETKADETPE 2032

  Fly  1402 ELTQLRDIEAESAKRELQDQLLDRLAASSINFENFSRHLNADFLDSERRASDSALMGDMEPDEYH 1466
            .:||:.|:...:                       |..:....::.:.:|:.::      |:|..
  Fly  2033 SVTQVSDVATST-----------------------SAPVAGGDIEKDEQATTAS------PEEEE 2068

  Fly  1467 HFR-RYSLAQE--QPVEEYPSDDYVYISQIEVRTLTGTRTWLKEDFYTHEPNDFSDSKSPVRDED 1528
            ..: ..:.|.|  ||.|:.|.|:    .::|    :||:....|          ||.: |: || 
  Fly  2069 EIKPTIAPAAEIPQPSEKEPVDE----QEVE----SGTKATPAE----------SDGQ-PI-DE- 2112

  Fly  1529 SWARAVLAAEAEAAEFDSTNAIYSYDIVGDHENLDQERSSSNDSEDTRQTVVE-----IDDEDEF 1588
                   .|.|.:...|                   |.|::..:::...||..     :.|::..
  Fly  2113 -------IAPATSGPID-------------------EASTAAPTKEESTTVASAASPAVHDDEIK 2151

  Fly  1589 EFELDEGISDNNERTQPTDESHH--DTSECEEAERNADRYENRGAQDWEEVDDVE-----DFLDY 1646
            :....:.::|..|...|.||:..  |.|.           ::..|||.|:.|..|     ..:..
  Fly  2152 DVTTTQPVADEKEVAAPQDETKTSIDVST-----------DSPTAQDDEKQDKTEAPVAPTTVSS 2205

  Fly  1647 GFDDGAVGGATPYSDPDSFIE-------QIYNEAIKNRKQSGILREYETIVQEQLPSDLSESEKE 1704
            ...|.|...:||..:..|.:|       .|.::.|......| .....|..::|.|..:|..:.|
  Fly  2206 PTADSAADSSTPTVEVPSPVEIDTKPMDDIMSQTIAPHTADG-AASTSTEDEDQAPVTVSPQDAE 2269

  Fly  1705 K-----SGSDSEKYALWAKTRELERSHSGTRHSDVDIALGLIPESDHRDSEMRYLGDAHVVARQS 1764
            |     :..||:|                            .|.|:...       ||..:...:
  Fly  2270 KTPVSPAPQDSDK----------------------------TPSSEAPQ-------DADEIPATA 2299

  Fly  1765 TRLRTRYGFNPKLEVGDLEDDIEVDLNYKPKREYNWRKNFRLDDNEEGERSVQVKTEEDEEQEAR 1829
            |.|                ||.::.....|:             .::|..:.....:||:.|...
  Fly  2300 TPL----------------DDNKIPATVAPQ-------------TDDGVPATAAPLDEDKIQTTA 2335

  Fly  1830 DQFEEEFGWQDREQELEEE------------LYQDHEQPL---YANEENGE--IENVEL-----L 1872
            ...:|| ........|::|            :....|:|.   |..||:.|  :.:||.     .
  Fly  2336 APLDEE-KIPSTAAPLDDEKIPAPVSPVVFDVEPSSEKPAVSEYDGEESTEPPVHDVETSTDEPT 2399

  Fly  1873 ENRRISLGGESITLFSRSPV--REILP---------DVPEELPQEEEALEEQPEAVAPLEDLPAE 1926
            .:.::.....:....|.||.  .||:|         :|||:..::.|..:|.||......:|..|
  Fly  2400 SDAKLKPPTSAPATPSESPATEAEIVPETAAPELEKEVPEKATEQPELEKETPEKATEQPELEKE 2464

  Fly  1927 KPKKKKSKKKLRKGSKTEEELRDDNDSDTQMGSSRRSDDQEPTDPPKRKTRSRRSSRSSLTNEEP 1991
            .|:|...:.:|.|  :|.|:..:..:.           ::|.||    |...:..|....|..||
  Fly  2465 TPEKATEQPELEK--ETPEKATEQPEL-----------EKEVTD----KATEQPESVDEKTTPEP 2512

  Fly  1992 NGGSGPFSPRSSLAFVGESLEGIAEFEPQEREEEQSTKKRTKKRKKTSTKECKEEAKEETQTQAI 2056
                          .|..||:...|.|.....||:|..|:.|.::   |:|..::..||.:..|:
  Fly  2513 --------------VVKPSLDSTEEDEESVESEEESADKKDKNKE---TEEDTDKKHEEPEVPAV 2560

  Fly  2057 DDSQLDRALAAALAEIAPVSVSTNLTPESTHQNLLSTISTGQSVCITPASSIEEIG--------- 2112
                     .:.:.:.:..:|.|...|...|   |::.:|      ||.:..:.:|         
  Fly  2561 ---------VSEIPQPSEEAVPTTGHPLFPH---LASSTT------TPPAVDDRVGEEDEENTTV 2607

  Fly  2113 --GSPSSTSTTVAAVVPARS 2130
              .|.::||||.:.|..|.|
  Fly  2608 KLSSSTTTSTTESPVTSAPS 2627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LmptNP_996113.2 GBP_C <103..201 CDD:303769 19/112 (17%)
ARGLU 110..255 CDD:291991 34/199 (17%)
coiled coil 170..181 CDD:293879 2/10 (20%)
coiled coil 190..201 CDD:293879 2/10 (20%)
tncNP_001247300.1 VWC 235..296 CDD:214564
PHA02664 <433..595 CDD:177447
Ehrlichia_rpt 529..1065 CDD:118064 92/491 (19%)
DUF863 <1684..>1788 CDD:283539 30/172 (17%)
VWC 2762..>2805 CDD:302663
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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