DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lmpt and leo1

DIOPT Version :9

Sequence 1:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster
Sequence 2:NP_996950.1 Gene:leo1 / 404599 ZFINID:ZDB-GENE-040426-2435 Length:696 Species:Danio rerio


Alignment Length:630 Identity:129/630 - (20%)
Similarity:203/630 - (32%) Gaps:226/630 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  1558 DHENLDQERSSSN--DSEDTRQTVVEIDDEDEFEFELDEGISDNNERTQPTDESHHDTSEC---- 1616
            |||   :.||:||  .||..:......|||||     |.|...|.|......|..|.:...    
Zfish    30 DHE---RPRSASNASGSESAQSDRDHDDDEDE-----DGGKPSNKELFGDDSEDEHGSQHSGSQH 86

  Fly  1617 ---------------------------EEAERNADRYE--------------NRGAQDWEEVDDV 1640
                                       .::||:.::.:              :||.||.|:.||.
Zfish    87 SGSRHSGSRHSGSRHSGSRHSGSQHSGSQSERSGNQSDATMHSDNEHSMSEAHRGEQDDEDDDDR 151

  Fly  1641 EDFLDYGFDDGAVGGATPYSDPDSFIEQIYNEAIKNRKQSGILREYETIVQEQLPSDLSESEKEK 1705
            ....|.|         :|.|...|           .|...|                 |.|...:
Zfish   152 GHRSDVG---------SPASGAGS-----------RRSDRG-----------------SGSPGSE 179

  Fly  1706 SGSDSEKYALWAKTRELERSHSGTRHSDVDIALGLIPESDHRDSEMRYLG---DAHVVARQSTRL 1767
            :||              .||.:|:.|||        |.:.|.|.|    |   |||....     
Zfish   180 AGS--------------PRSEAGSGHSD--------PGTPHTDGE----GSGKDAHSGDE----- 213

  Fly  1768 RTRYGFNPKLEVGDLEDDIEVDLNYKPKREYNWRKNFRLDDNEEGERSVQVKTEEDEEQEARDQF 1832
              ::|.:.|   .|..:|.:...|...:||       |.|:..|.::|..:|..:.|:...|.:.
Zfish   214 --KWGGDGK---SDQSEDEDKQQNSDDERE-------RSDEEGERQKSESIKGSDSEDDFTRKKK 266

  Fly  1833 EEEFGWQDREQELEEELYQDHEQPLYANEENGEIENVELLENRRISLGGESITLFSRSPVREILP 1897
            ::.....|.:.:.|.   |..::|. ||:..||.:::             |....:..|:....|
Zfish   267 KKIASDSDSDSDAET---QGGKKPA-ANDLFGEADDI-------------SSDSDAEKPLTPGQP 314

  Fly  1898 ---------DVPEELPQEEEALE-EQPEAVAPL-EDL-----------------PAEKPKKKKSK 1934
                     |.|||.|..|..:| |.|:....| .||                 |.....:.:.:
Zfish   315 LDADDGMEGDQPEEEPAPETRIEVEIPKVSTDLGSDLYFVKLPNFLSVEPRPFDPQYYEDEFEDE 379

  Fly  1935 KKLRKGSKTEEELRDDNDSDTQMGSSRRSDDQEPTDPPKRKTRSRRSSRSSLT----NEEPNGGS 1995
            :.|.:..:|..:|:.:|   |....|||  |:|..:..:...|..:.|..|::    ||..:...
Zfish   380 EMLDEEGRTRLKLKVEN---TIRWRSRR--DEEGNEVKESNARIVKWSDGSMSLHLGNEVFDVYK 439

  Fly  1996 GPFSPRSSLAFV--GESLEGIAEFEPQEREEEQSTKKRTKKRKKTSTKE-C-------------- 2043
            .|.....:..|:  |..|:|.|.|:.:......||...|.::...|..: |              
Zfish   440 APLQGDHNHLFIRQGTGLQGQAVFKTKLTFRPHSTDSATHRKMTLSLADRCSKTQKIRILPMAGR 504

  Fly  2044 -----------KEE------AKEETQTQAIDDSQLDRALAAALAE 2071
                       |||      .:.|:|.:.:.:.|..|.|.|...|
Zfish   505 DPESQRNEMIKKEEERLRASIRRESQQRRMREKQHQRGLNAGYLE 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LmptNP_996113.2 GBP_C <103..201 CDD:303769
ARGLU 110..255 CDD:291991
coiled coil 170..181 CDD:293879
coiled coil 190..201 CDD:293879
leo1NP_996950.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..336 85/410 (21%)
PHA02664 <161..260 CDD:177447 35/169 (21%)
Leo1 352..510 CDD:281933 28/162 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..560 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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