DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lmpt and Leo1

DIOPT Version :10

Sequence 1:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster
Sequence 2:NP_001005548.1 Gene:Leo1 / 300837 RGDID:1549772 Length:678 Species:Rattus norvegicus


Alignment Length:789 Identity:157/789 - (19%)
Similarity:299/789 - (37%) Gaps:253/789 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ADAEELPRMRERLDKQIKEAAER-EALAGTNVMQDGVLYVNGIRV-------DPAGDKRQALAAE 108
            ||.|:|      ...:.:..||| ::.:|::...|.....:|...       |..||..|....|
  Rat     2 ADMEDL------FGSEAESEAERKDSDSGSDSDSDQDNGASGSNASGSESDQDERGDSGQPSNKE 60

  Fly   109 LARQQQIE--------ADTRRQLAEAEAKLVEERLRVQREKEESEEQQRKLVEA----------- 154
            |......|        :|...:.::..::..||| ....:.|.|:..|....||           
  Rat    61 LFGDDSEEEGAPHHSGSDNHSEQSDNRSEASEER-SDHEDNEPSDVDQHSGSEAHNDDDDDDDDE 124

  Fly   155 ----ERQRERE---QAEKELQEQREAERRQLEAEENQRKQRENEEKERLENERRLIDAEREREEN 212
                |..|..|   .:|.|..|:.:::..:.:.|:   |..::::.|:|:|..   |.|||:..:
  Rat   125 DDDDEGHRSDEGSHHSEAEGSEKAQSDDEKWDGED---KSDQSDDDEKLQNSD---DEEREQGSD 183

  Fly   213 ERRLQ---EAEEQREREESERRIVVAERQREQ-AEAEKERAEQQRILAEAEAAQAERRLFDAEIQ 273
            :.:||   :.||:.:..:.|.|..:::..|:| :|.||..::.:|..|             ::..
  Rat   184 DEKLQNSADEEEKMQNTDDEDRAQLSDDDRQQLSEEEKGNSDDERPAA-------------SDND 235

  Fly   274 RERDQADEEGQALRDAEIVERLLAAERELSPSATESEL-----EEDAAIAEQSRRLISSRTDLEQ 333
            .|:..:|:|.:                   |..::.|.     :|...::::.||    .:|.|:
  Rat   236 EEKQNSDDEDR-------------------PQVSDEEKMQNSDDERPQVSDEDRR----HSDDEE 277

  Fly   334 KQRMIEENARRFLEAEEEMVMLQQRQLQASHSKEEADE------------YAGMEPVV-----EE 381
            :|....|:||. .::|:|::.::::....|.|:.::|.            :.|.:.:.     |:
  Rat   278 EQDQKSESARG-SDSEDEVLRMKRKNAIPSDSEVDSDTEVPKDNNGTMDLFGGADDISSGSDGED 341

  Fly   382 LCVKKVAPPRFQEP-----------PEEPM--------VHKVKTQFGQGSGPEDAYSAKSKTLTF 427
                  .||...:|           .|||:        :.||.|..|     .|.|..|..... 
  Rat   342 ------KPPTPGQPVDENGLPQDQQEEEPIPETRIEVEIPKVNTDLG-----NDLYFVKLPNFL- 394

  Fly   428 PGVSDEGSSLEPKTPFSIQ--QSSFSTQP--SDEGN-----RIESE-----RPEPEGEDQIQE-- 476
                    |:||: ||..|  :..|..:.  .:||.     ::|:.     |.:.|| ::|:|  
  Rat   395 --------SVEPR-PFDPQYYEDEFEDEEMLDEEGRTRLKLKVENTIRWRMRRDEEG-NEIKESN 449

  Fly   477 ---VQYTED-------------YLRSLDGIKNRPLMREDGSG--RRRAFKK----RRSSGSSNSS 519
               |::::.             |...|.|..|...:|: |:|  .:..||.    |..|..|.:.
  Rat   450 ARIVKWSDGSMSLHLGNEVFDVYKAPLQGDHNHLFIRQ-GTGLQGQAVFKTKLTFRPHSTDSATH 513

  Fly   520 RE------SRASRDEELKMF-----------TSL---EEEELRHGDREDYNPIKYTSEPTLRVKS 564
            |:      .|.|:.:::::.           |.:   |||.||...|.:      :.:..:|.|.
  Rat   514 RKMTLSLADRCSKTQKIRILPMAGRDPECQRTEMIKKEEERLRASIRRE------SQQRRMREKQ 572

  Fly   565 HRRHKRSPAKDVRPTAESTTSLEMLGEESTNPWGEVVPEHYKDTEFWKREKALSIDEEEIELERP 629
            |:|            ..|.:.||              |:.|.:.|  :.|:::|:    ..::..
  Rat   573 HQR------------GLSASYLE--------------PDRYDEEE--EGEESVSL----AAIKNR 605

  Fly   630 SRGEDVEEEATNEPKSSSFEEATEAQNEQAVAALKQQLSKEQLDKEAEKDNPQAVDTSDSNKSNL 694
            .:|...||.|  ...||..:|.:|....|.:...|:..|.|:.:...::   :|.|...:||.:.
  Rat   606 YKGGIREERA--RIYSSDSDEGSEEDKAQRLLKAKKLNSDEEGESSGKR---KAEDDDKANKKHK 665

  Fly   695 QTSIAAEEQ 703
            :..|:.||:
  Rat   666 KYVISDEEE 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LmptNP_996113.2 Smc <101..>371 CDD:440809 59/304 (19%)
PTZ00121 <105..689 CDD:173412 138/712 (19%)
Leo1NP_001005548.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..373 81/426 (19%)
MSCRAMM_ClfA <11..373 CDD:468110 77/411 (19%)
Leo1 386..548 CDD:461126 34/173 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 559..596 12/70 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 613..678 17/67 (25%)

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