DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lmpt and Leo1

DIOPT Version :9

Sequence 1:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster
Sequence 2:NP_001034611.1 Gene:Leo1 / 235497 MGIID:2685031 Length:667 Species:Mus musculus


Alignment Length:794 Identity:159/794 - (20%)
Similarity:292/794 - (36%) Gaps:274/794 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ADAEELPRMRERLDKQIKEAAER---EALAGTNVMQDGVLYVNGIR----------VDPAGDKRQ 103
            ||.|:|      ...:.:..|||   |:.:.::..||     ||..          .|..||..|
Mouse     2 ADMEDL------FGSEAESEAERKDSESESDSDSDQD-----NGASGSNASGSESDQDDRGDSGQ 55

  Fly   104 ALAAELARQQQIE---------------ADTRRQLAEAEAKLVEERLRVQREKEESEEQQRKLVE 153
            ....||......|               :|.|.:.:|...         ..:.|.|:|.|....|
Mouse    56 PSNKELFGDDSEEEGASHHSGSDNHSERSDNRSEASERSD---------HEDNEPSDEDQHSGSE 111

  Fly   154 AERQREREQAEKELQEQREAERRQLEAEENQRKQRENE-----------EKERLENERRLIDAER 207
            |....:.|      ..:.:...|..|||.:::.|.::|           :.|:|:|..   |.:|
Mouse   112 AHNDDDDE------GHRSDEGSRHSEAEGSEKAQSDDEKWDGEDKSDQSDDEKLQNSD---DEDR 167

  Fly   208 EREENERRLQEA---EEQREREESERRIVVAERQREQ-AEAEKERAEQQRILAEAEAAQAERRLF 268
            |:..:|.:||.:   ||:.:..:.|.|..:::..|:| :|.||..::.:..:|            
Mouse   168 EQGSDEDKLQNSDDDEEKMQNTDDEDRAQISDDDRQQLSEEEKGNSDDEHPVA------------ 220

  Fly   269 DAEIQRERDQADEEGQALRDAEIVERLLAAERELSPSATESEL-----EEDAAIAEQSRRLISSR 328
             ::...|:..:|:|.|                   |..::.|.     :|...::::..|    |
Mouse   221 -SDNDEEKQNSDDEDQ-------------------PQVSDEEKMQNSDDERPQVSDEDGR----R 261

  Fly   329 TDLEQKQRMIEENARRFLEAEEEMVMLQQRQLQASHSKEEADE------------YAGMEPVV-- 379
            :|.|::|....|:||. .::|:|::.|:::....|.|:.::|.            :.|.:.:.  
Mouse   262 SDGEEEQDQKSESARG-SDSEDEVLRLKRKNAIPSDSEADSDTEVPKDNNGTMDLFGGADDISSG 325

  Fly   380 ---EELCVKKVAPPRFQEP-----------PEEPM--------VHKVKTQFGQGSGPEDAYSAKS 422
               |:      .||...:|           .|||:        :.||.|..|     .|.|..|.
Mouse   326 SDGED------KPPTPGQPVDENGLPQDQQEEEPIPETRIEVEIPKVNTDLG-----NDLYFVKL 379

  Fly   423 KTLTFPGVSDEGSSLEPKTPFSIQ--QSSFSTQP--SDEGN-----RIESE-----RPEPEGEDQ 473
            ....         |:||: ||..|  :..|..:.  .:||.     ::|:.     |.:.|| ::
Mouse   380 PNFL---------SVEPR-PFDPQYYEDEFEDEEMLDEEGRTRLKLKVENTIRWRIRRDEEG-NE 433

  Fly   474 IQE-----VQYTED-------------YLRSLDGIKNRPLMREDGSG--RRRAFKK----RRSSG 514
            |:|     |::::.             |...|.|..|...:|: |:|  .:..||.    |..|.
Mouse   434 IKESNARIVKWSDGSMSLHLGNEVFDVYKAPLQGDHNHLFIRQ-GTGLQGQAVFKTKLTFRPHST 497

  Fly   515 SSNSSRE------SRASRDEELKMF-----------TSL---EEEELRHGDREDYNPIKYTSEPT 559
            .|.:.|:      .|.|:.:::::.           |.:   |||.||...|.:      :.:..
Mouse   498 DSATHRKMTLSLADRCSKTQKIRILPMAGRDPECQRTEMIKKEEERLRASIRRE------SQQRR 556

  Fly   560 LRVKSHRRHKRSPAKDVRPTAESTTSLEMLGEESTNPWGEVVPEHYKDTEFWKREKALSIDEEEI 624
            :|.|.|:|            ..|.:.||              |:.|.:.|  :.|:::|:    .
Mouse   557 MREKQHQR------------GLSASYLE--------------PDRYDEEE--EGEESVSL----A 589

  Fly   625 ELERPSRGEDVEEEATNEPKSSSFEEATEAQNEQAVAALKQQLSKEQLDKEAEKDNPQAVDTSDS 689
            .::...:|...||.|  ...||..:|.:|....|.:...|:..|.|:.:...::   :|.|...:
Mouse   590 AIKNRYKGGIREERA--RIYSSDSDEGSEEDKAQRLLKAKKLNSDEEGESSGKR---KAEDDDKA 649

  Fly   690 NKSNLQTSIAAEEQ 703
            ||.:.:..|:.||:
Mouse   650 NKKHKKYVISDEEE 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LmptNP_996113.2 GBP_C <103..201 CDD:303769 23/123 (19%)
ARGLU 110..255 CDD:291991 35/174 (20%)
coiled coil 170..181 CDD:293879 2/10 (20%)
coiled coil 190..201 CDD:293879 4/21 (19%)
Leo1NP_001034611.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..362 83/431 (19%)
PHA02664 <61..209 CDD:177447 34/165 (21%)
Leo1 375..533 CDD:281933 33/169 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 548..585 12/70 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..667 17/67 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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