DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lmpt and Ibsp

DIOPT Version :9

Sequence 1:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster
Sequence 2:NP_032344.2 Gene:Ibsp / 15891 MGIID:96389 Length:324 Species:Mus musculus


Alignment Length:366 Identity:81/366 - (22%)
Similarity:127/366 - (34%) Gaps:97/366 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   460 RIESERPEPEGEDQIQEVQYTEDYLRSLDGIKNRPLMREDGSGRRRAFKKRRSSGSSNSSRESRA 524
            ||::|..|..|     ..:|...|..........||.|         |..:..|.||..:.:..:
Mouse    25 RIKAEDSEENG-----VFKYRPRYFLYKHAYFYPPLKR---------FPVQGGSDSSEENGDGDS 75

  Fly   525 SRDEELKMFTSLEEEELRHGDREDYNPIKYTSEPTLRVKSHRRHKRSPAKDVRPTAESTTSLEML 589
            |.:|..:..||.|||     :.||       ||..              :|....||::| |..|
Mouse    76 SEEEGEEEETSNEEE-----NNED-------SEGN--------------EDQEAEAENST-LSTL 113

  Fly   590 GEESTNPWGEVVPEHYKDTEFWKREKALSIDEEEIELERPSRGEDVEEEATNEPKSSSFEEATEA 654
            ...:.:...|..|:            |.:.:...::|  |.:..|.|..|   ||....:|..|.
Mouse   114 SGVTASYGAETTPQ------------AQTFELAALQL--PKKAGDAESRA---PKVKESDEEEEE 161

  Fly   655 QNEQAVAALKQQLSKEQLDKEAEKD-NPQAVDTSDSNKSNLQTSIAAEEQSRGGSPGLR-RSPRM 717
            :.|:          :|..::|||.| |..||:.:.:|    .|.:.....|.||..|.. .:...
Mouse   162 EEEE----------EENENEEAEVDENELAVNGTSTN----STEVDGGNGSSGGDNGEEAEAEEA 212

  Fly   718 DEMEHYPERWSASQEQQSVQQQPPRTAPAINVQQPDTAPWRDQYGLLMEGLSDFYDFTASVNPSR 782
            ...|...|..:..:|..||..|   ||..:|..|..|.| .:.||              :.:|..
Mouse   213 SVTEAGAEGTTGGRELTSVGTQ---TAVLLNGFQQTTPP-PEAYG--------------TTSPPI 259

  Fly   783 SRSASRNPSPAPKNVANLMDGDTERSLEVYDDTQEGVMAGE 823
            .:|::.......:...|    :.....||||: :.|...|:
Mouse   260 RKSSTVEYGGEYEQTGN----EYNNEYEVYDN-ENGEPRGD 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LmptNP_996113.2 GBP_C <103..201 CDD:303769
ARGLU 110..255 CDD:291991
coiled coil 170..181 CDD:293879
coiled coil 190..201 CDD:293879
IbspNP_032344.2 BSP_II 17..321 CDD:283165 81/366 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..228 49/225 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..263 6/34 (18%)
Cell attachment site. /evidence=ECO:0000255 293..295 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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