DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lmpt and Dmp1

DIOPT Version :9

Sequence 1:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster
Sequence 2:NP_001345942.1 Gene:Dmp1 / 13406 MGIID:94910 Length:503 Species:Mus musculus


Alignment Length:611 Identity:125/611 - (20%)
Similarity:212/611 - (34%) Gaps:194/611 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1535 LAAEAEAAEFDSTNAIYSYDIVGDHENLDQERSSSNDSEDTRQTVVEIDDEDEFEFELDEGISDN 1599
            |:.....|.:.:|.:..|.:..||........::|..||:::.:              .||.:::
Mouse    13 LSCALPVARYHNTESESSEERTGDLAGSPPPPTNSESSEESQAS--------------PEGQANS 63

  Fly  1600 NERTQPTDESHHDTSECEEAERNADRYENR-----------GAQDWEEVDDVEDFL------DYG 1647
            :         |.|:||..| |...||.:.|           ||...::.||..|..      |.|
Mouse    64 D---------HTDSSESGE-ELGYDRGQYRPAGGLSKSTGTGADKEDDEDDSGDDTFGDEDNDLG 118

  Fly  1648 FDDGAVGGATPY-SDPDSFIEQIYNEAIKNRKQSGILREYETIVQEQLPSDL------------- 1698
            .::|..||.:.. ||.||......:|...:::.|.          :..|||.             
Mouse   119 PEEGQWGGPSKLDSDEDSTDTTQSSEDSTSQENSA----------QDTPSDSKDHDSEDEADSRP 173

  Fly  1699 --------SESEKEKSGSDSEKYALWAKTRELERSHSGTRHSDVDIALGLIPESDHRDSEMRYLG 1755
                    ||||:::.|..||.          |.||......|.:......|||...|.      
Mouse   174 EAGDSTQDSESEEQRVGGGSEG----------ESSHGDGSEFDDEGMQSDDPESTRSDR------ 222

  Fly  1756 DAHVVARQSTRLRTRYGFNPKLEVGDLEDDIEVDLNYKPKREYNWRKNFR----LDDNEEGE--- 1813
             .|  ||.|:.     |...:...||.|.....|.:.....|::.||:||    .:::..||   
Mouse   223 -GH--ARMSSA-----GIRSEESKGDHEPTSTQDSDDSQSVEFSSRKSFRRSHVSEEDYRGELTD 279

  Fly  1814 ---RSVQVKTEED--EEQEARDQFEEEFGWQDREQELEEELYQDHEQPLYANEENGEIENVELLE 1873
               |..|..:.||  .::|:|.:.:|:    ..|.:.:|:..:..:....::||.||        
Mouse   280 SNSRETQSDSTEDTASKEESRSESQED----TAESQSQEDSPEGQDPSSESSEEAGE-------- 332

  Fly  1874 NRRISLGGESITLFSRSPVREILPDVPEELPQEEEALEEQPEAVAPLEDLPAEKPKKKKSKKKLR 1938
                                          |.:|.:.|.| |.|                     
Mouse   333 ------------------------------PSQESSSESQ-EGV--------------------- 345

  Fly  1939 KGSKTEEELRDDNDSDTQMGSSRRSDDQEPTDPPKRKTRSRRSSRSSLTNEEPNGGSGPFSPRSS 2003
                |.|...|:.|:.:|.|.   .:|.|.::.....|.|  ||.|..|.|:.:..|     ..|
Mouse   346 ----TSESRGDNPDNTSQAGD---QEDSESSEEDSLNTFS--SSESQSTEEQADSES-----NES 396

  Fly  2004 LAFVGESLEGIAEFEPQEREEEQSTKKRTKKRKKTSTKECKEEAKEETQTQ----AIDDSQLDRA 2064
            |:...||.|...:.:...:|..||....|:.|.:.|..|....::|::.:|    :.::|....:
Mouse   397 LSLSEESQESAQDGDSSSQEGLQSQSASTESRSQESQSEQDSRSEEDSDSQDSSRSKEESNSTGS 461

  Fly  2065 LAAALAEIAPVSV---STNLTPESTH 2087
            .:::..:|.|.::   |..|..::.|
Mouse   462 ASSSEEDIRPKNMEADSRKLIVDAYH 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LmptNP_996113.2 GBP_C <103..201 CDD:303769
ARGLU 110..255 CDD:291991
coiled coil 170..181 CDD:293879
coiled coil 190..201 CDD:293879
Dmp1NP_001345942.1 DMP1 1..503 CDD:311295 125/611 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..503 123/601 (20%)
Cell attachment site. /evidence=ECO:0000255 350..352 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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