DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lmpt and fhl2

DIOPT Version :10

Sequence 1:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster
Sequence 2:NP_001120233.1 Gene:fhl2 / 100145283 XenbaseID:XB-GENE-969632 Length:279 Species:Xenopus tropicalis


Alignment Length:76 Identity:21/76 - (27%)
Similarity:29/76 - (38%) Gaps:11/76 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   666 QLSKEQLDKE-AEKDNPQAVDTSDSNKSNLQTSIAAEEQSRGGSPGLRRSPRMDEMEHYPERWSA 729
            |..|..:||. |.||.........||:.:.:.|    |..:...||.|:      ||:....|..
 Frog    70 QCKKSLVDKPFAAKDEHLICTECYSNEYSSKCS----ECKKTIMPGTRK------MEYKGNSWHE 124

  Fly   730 SQEQQSVQQQP 740
            :....|..|||
 Frog   125 TCFICSRCQQP 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LmptNP_996113.2 Smc <101..>371 CDD:440809
PTZ00121 <105..689 CDD:173412 7/23 (30%)
fhl2NP_001120233.1 LIM <5..33 CDD:413332
LIM1_FHL2 36..97 CDD:188806 9/26 (35%)
LIM2_FHL2 101..157 CDD:188810 12/45 (27%)
LIM3_Fhl2 162..218 CDD:188815
LIM4_FHL2 221..278 CDD:188817
Blue background indicates that the domain is not in the aligned region.

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