DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rh4 and XB5884180

DIOPT Version :9

Sequence 1:	NP_476701.1	Gene:	Rh4 / 39887	FlyBaseID:	FBgn0003250	Length:	378	Species:	Drosophila melanogaster
Sequence 2:	NP_001039256.1	Gene:	XB5884180 / 734122	XenbaseID:	XB-GENE-5884181	Length:	345	Species:	Xenopus tropicalis

Alignment Length:	327	Identity:	87/327 - (26%)
Similarity:	145/327 - (44%)	Gaps:	21/327 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    55 YMLGVFYIFLFCA-STVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCL-KAPIFIYNSFHR 117
            |.:..|.:||... |...|.:||.:......||.|.|:|:|||:..||:|.| ...|.:..::|.
Frog    26 YSILSFLMFLNAVFSICNNAIVILVTLKHPQLRNPINIFILNLSFSDLMMALCGTTIVVSTNYHG 90

  Fly   118 GFALGNTWCQIFASIG-SYSGIGAGMTNAAIGYDRYNVITKPMNRNMTFTKAVIMNII-IWLYCT 180
            .|.||..:| ||.... :|.||.:..:...:.|:||||:.:|:......||.....:: |||:|.
Frog    91 YFYLGKQFC-IFQGFAVNYFGIVSLWSLTLLAYERYNVVCEPIGALKLSTKRGYQGLVFIWLFCL 154

  Fly   181 PWVVLPLTQFWDRFVPEGYLTSCSFDYLSDNFDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVF 245
            .|.:.||.. |..:.|||..||||..:...::....::.:.|...|:.|..:|.:.|..|:..:.
Frog   155 FWAIAPLFG-WSSYGPEGVQTSCSIGWEERSWSNYSYIISYFLTCFIIPVGIIGFSYGSILRSLH 218

  Fly   246 SHEKALREQAKKMNVESLRSNVDKSKETAEIRIAKAAITICFLFFVSWTPYGVMSLIGAFGDKSL 310
            ...:.:.:|..|.|...            |.|:....:.:...|.:.|.||.|.:||.....:..
Frog   219 QLNRKIEQQGGKTNPRE------------EKRVVIMVLFMVLAFLICWLPYTVFALIVVINPQLY 271

  Fly   311 LTPGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLG-VNEKSGEISSAQSTTTQEQQQ 374
            ::|.|..:|....|.....:|.:|...:.::| ....:|...| :|..|.| ...:|.:.|.:..
Frog   272 ISPLAATLPTYFAKTSPVYNPIIYIFLNKQFR-TYAVQCLTCGHINLDSLE-EDTESVSAQAENM 334

  Fly   375 TT 376
            .|
Frog   335 LT 336

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rh4	NP_476701.1	7tmA_photoreceptors_insect	55..345	CDD:320207	79/293 (27%)
		TM helix 1	57..81	CDD:320207	7/24 (29%)
		TM helix 2	90..111	CDD:320207	10/21 (48%)
		TM helix 3	127..149	CDD:320207	5/22 (23%)
		TM helix 4	170..186	CDD:320207	5/16 (31%)
		TM helix 5	215..238	CDD:320207	4/22 (18%)
		TM helix 6	279..301	CDD:320207	5/21 (24%)
		TM helix 7	313..338	CDD:320207	6/24 (25%)
XB5884180	NP_001039256.1	7tmA_Parietopsin	27..306	CDD:320213	78/293 (27%)
		TM helix 1	28..54	CDD:320213	7/25 (28%)
		TM helix 2	61..87	CDD:320213	10/25 (40%)
		TM helix 3	99..129	CDD:320213	11/30 (37%)
		TM helix 4	142..160	CDD:320213	5/17 (29%)
		TM helix 5	187..217	CDD:320213	6/29 (21%)
		TM helix 6	234..264	CDD:320213	8/41 (20%)
		TM helix 7	274..299	CDD:320213	6/24 (25%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D310934at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010