Protein Alignment Rh4 and parietopsin

DIOPT Version :10

• Sequence 1: NP_476701.1
• Gene: Rh4 / 39887
• FlyBaseID: FBgn0003250
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001039256.1
• Gene: parietopsin / 734122
• XenbaseID: XB-GENE-5884181
• Length: 345
• Species: Xenopus tropicalis
• Alignment Length: 327
• Identity: 87/327 - (26%)
• Similarity: 145/327 - (44%)
• Gaps: 21/327 - (6%)

  Fly    55 YMLGVFYIFLFCA-STVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCL-KAPIFIYNSFHR 117
            |.:..|.:||... |...|.:||.:......||.|.|:|:|||:..||:|.| ...|.:..::|.
 Frog    26 YSILSFLMFLNAVFSICNNAIVILVTLKHPQLRNPINIFILNLSFSDLMMALCGTTIVVSTNYHG 90

  Fly   118 GFALGNTWCQIFASIG-SYSGIGAGMTNAAIGYDRYNVITKPMNRNMTFTKAVIMNII-IWLYCT 180
            .|.||..:| ||.... :|.||.:..:...:.|:||||:.:|:......||.....:: |||:|.
 Frog    91 YFYLGKQFC-IFQGFAVNYFGIVSLWSLTLLAYERYNVVCEPIGALKLSTKRGYQGLVFIWLFCL 154

  Fly   181 PWVVLPLTQFWDRFVPEGYLTSCSFDYLSDNFDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVF 245
            .|.:.||.. |..:.|||..||||..:...::....::.:.|...|:.|..:|.:.|..|:..:.
 Frog   155 FWAIAPLFG-WSSYGPEGVQTSCSIGWEERSWSNYSYIISYFLTCFIIPVGIIGFSYGSILRSLH 218

  Fly   246 SHEKALREQAKKMNVESLRSNVDKSKETAEIRIAKAAITICFLFFVSWTPYGVMSLIGAFGDKSL 310
            ...:.:.:|..|.|...            |.|:....:.:...|.:.|.||.|.:||.....:..
 Frog   219 QLNRKIEQQGGKTNPRE------------EKRVVIMVLFMVLAFLICWLPYTVFALIVVINPQLY 271

  Fly   311 LTPGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLG-VNEKSGEISSAQSTTTQEQQQ 374
            ::|.|..:|....|.....:|.:|...:.::| ....:|...| :|..|.| ...:|.:.|.:..
 Frog   272 ISPLAATLPTYFAKTSPVYNPIIYIFLNKQFR-TYAVQCLTCGHINLDSLE-EDTESVSAQAENM 334

  Fly   375 TT 376
            .|
 Frog   335 LT 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh4	NP_476701.1	7tmA_photoreceptors_insect	55..345	CDD:320207	79/293 (27%)
		TM helix 1	56..82	CDD:320207	7/26 (27%)
		TM helix 2	89..114	CDD:320207	10/25 (40%)
		TM helix 3	126..156	CDD:320207	11/30 (37%)
		TM helix 4	166..186	CDD:320207	7/20 (35%)
		TM helix 5	214..243	CDD:320207	6/28 (21%)
		TM helix 6	273..303	CDD:320207	8/29 (28%)
		TM helix 7	313..338	CDD:320207	6/24 (25%)
parietopsin	NP_001039256.1	7tmA_Parietopsin	27..306	CDD:320213	78/293 (27%)
		TM helix 1	28..54	CDD:320213	7/25 (28%)
		TM helix 2	61..87	CDD:320213	10/25 (40%)
		TM helix 3	99..129	CDD:320213	11/30 (37%)
		TM helix 4	142..160	CDD:320213	5/17 (29%)
		TM helix 5	187..217	CDD:320213	6/29 (21%)
		TM helix 6	234..264	CDD:320213	8/41 (20%)
		TM helix 7	274..299	CDD:320213	6/24 (25%)