| Sequence 1: | NP_476701.1 | Gene: | Rh4 / 39887 | FlyBaseID: | FBgn0003250 | Length: | 378 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_067315.1 | Gene: | Rgr / 57811 | MGIID: | 1929473 | Length: | 291 | Species: | Mus musculus |
| Alignment Length: | 237 | Identity: | 47/237 - (19%) |
|---|---|---|---|
| Similarity: | 95/237 - (40%) | Gaps: | 45/237 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 200 CE---WV--NVV----RTRSYKEAVSIEIKLIDQCDSLASPETEVLVQAEVTEL-----SQKDAF 250
Fly 251 STVISSMRLLGEDCLINF--DTTALVALV---SGISNGCAERLVDMPEIELEEKFKGNTVFVIAQ 310
Fly 311 ARSEIEKPGLVKVGTVLSG----KRGIVCKSVFSEFKELVSMYAGPNEKLRAEQL--LKSLMVVN 369
Fly 370 DNPSERVMS---LP-TTRKLAMKNKTVFGTGDR--WGAPTLT 405 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rh4 | NP_476701.1 | 7tmA_photoreceptors_insect | 55..345 | CDD:320207 | 29/167 (17%) |
| TM helix 1 | 56..82 | CDD:320207 | |||
| TM helix 2 | 89..114 | CDD:320207 | |||
| TM helix 3 | 126..156 | CDD:320207 | |||
| TM helix 4 | 166..186 | CDD:320207 | |||
| TM helix 5 | 214..243 | CDD:320207 | 4/28 (14%) | ||
| TM helix 6 | 273..303 | CDD:320207 | 6/32 (19%) | ||
| TM helix 7 | 313..338 | CDD:320207 | 4/28 (14%) | ||
| Rgr | NP_067315.1 | 7tmA_Retinal_GPR | 17..277 | CDD:320200 | 22/106 (21%) |
| TM helix 1 | 18..44 | CDD:320200 | |||
| TM helix 2 | 51..77 | CDD:320200 | |||
| TM helix 3 | 88..118 | CDD:320200 | |||
| TM helix 4 | 126..146 | CDD:320200 | |||
| TM helix 5 | 173..202 | CDD:320200 | 6/27 (22%) | ||
| TM helix 6 | 204..234 | CDD:320200 | 7/33 (21%) | ||
| TM helix 7 | 244..269 | CDD:320200 | 7/24 (29%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||