Protein Alignment Rh4 and opn5

DIOPT Version :9

• Sequence 1: NP_476701.1
• Gene: Rh4 / 39887
• FlyBaseID: FBgn0003250
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001186975.1
• Gene: opn5 / 564181
• ZFINID: ZDB-GENE-041001-179
• Length: 352
• Species: Danio rerio
• Alignment Length: 323
• Identity: 91/323 - (28%)
• Similarity: 158/323 - (48%)
• Gaps: 31/323 - (9%)

  Fly    38 YIPEHWLTQLEPPASM----HYMLGVFYIFLF-CASTVGNGMVIWIFSTSKSLRTPSNMFVLNLA 97
            ||| |:|.:.:|.||.    ..::..|||.:. ..|..|||.|:::....|:...|..:..||||
Zfish    11 YIP-HYLLRGDPFASKLSKEADIVAAFYILVIGILSATGNGYVMYMTFKRKTKLKPPEIMTLNLA 74

  Fly    98 VFDL-IMCLKAPIFIYNSFHRGFALGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR 161
            :||. |.....|.||.:||...:..|...|:.:...|.:.|.|:.:|...:.:|||..|..  .|
Zfish    75 IFDFGISVSGKPFFIVSSFSHRWLFGWQGCRYYGWAGFFFGCGSLITMTVVSFDRYLKICH--LR 137

  Fly   162 NMTFTK---AVIMNIIIWLYCTPWVVLPLTQFWDRFVPEGYLTSCSFDY--LSDNFDTRLFVGTI 221
            ..|:.|   |.:..:.||.|...|..:|:.. |..:.||.:.|||:.|:  ...:...:.||..:
Zfish   138 YGTWLKRHHAFLSVVFIWAYAAFWATMPVVG-WGNYAPEPFGTSCTLDWWLTQASVSGQSFVMCM 201

  Fly   222 FFFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKKMNVESLRSNVDKSKETAEIRIAKAAITIC 286
            .||..:.||::|::.|..|:..|       :..||:::....|   :|:..:.|:::.|.|:.||
Zfish   202 LFFCLIFPTVIIVFSYVMIIFKV-------KSSAKEVSHFDTR---NKNNHSLEMKLTKVAMLIC 256

  Fly   287 FLFFVSWTPYGVMSLIGAFGDKSLLTPGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRC 349
            ..|.::|.||.|:|::.|||:...:....:::|....|..|..:|.:|.:      ::.:|:|
Zfish   257 AGFLIAWIPYAVVSVMSAFGEPDSVPIPVSVVPTLLAKSSAMYNPIIYQV------IDCKKKC 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh4	NP_476701.1	7tmA_photoreceptors_insect	55..345	CDD:320207	81/296 (27%)
		TM helix 1	57..81	CDD:320207	8/24 (33%)
		TM helix 2	90..111	CDD:320207	8/21 (38%)
		TM helix 3	127..149	CDD:320207	4/21 (19%)
		TM helix 4	170..186	CDD:320207	4/15 (27%)
		TM helix 5	215..238	CDD:320207	7/22 (32%)
		TM helix 6	279..301	CDD:320207	9/21 (43%)
		TM helix 7	313..338	CDD:320207	5/24 (21%)
opn5	NP_001186975.1	7tm_1	48..304	CDD:278431	76/268 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D704940at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920