| Sequence 1: | NP_476701.1 | Gene: | Rh4 / 39887 | FlyBaseID: | FBgn0003250 | Length: | 378 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_524368.5 | Gene: | Rh6 / 41889 | FlyBaseID: | FBgn0019940 | Length: | 363 | Species: | Drosophila melanogaster |
| Alignment Length: | 295 | Identity: | 60/295 - (20%) |
|---|---|---|---|
| Similarity: | 107/295 - (36%) | Gaps: | 104/295 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 129 GSKGLRSRIEQILAAANSTTTLKPSSVILFFANGLPSSVYEKLKDEFGAVYFDFGFDSDSD---- 189
Fly 190 -----SDISMLDDFDCEWVNVVRTRSYKEAVSIEIKL--IDQCDSLASPETEVLVQAEVTELSQK 247
Fly 248 DAFSTVISSMRLLGEDCLINFDT-TALVALVSGISNGC-AERLVDMPEIELEEKFKGNTVFVIAQ 310
Fly 311 ARSEIEKP----------GLVKVGTVLSGKRGIVCKSVFSEFKELVSMYAGPNEKLRA------- 358
Fly 359 -EQLLKSLMVVNDNPSERVMSLPTTRKLAMKNKTV 392 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rh4 | NP_476701.1 | 7tmA_photoreceptors_insect | 55..345 | CDD:320207 | 46/238 (19%) |
| TM helix 1 | 56..82 | CDD:320207 | |||
| TM helix 2 | 89..114 | CDD:320207 | |||
| TM helix 3 | 126..156 | CDD:320207 | 7/26 (27%) | ||
| TM helix 4 | 166..186 | CDD:320207 | 3/19 (16%) | ||
| TM helix 5 | 214..243 | CDD:320207 | 6/30 (20%) | ||
| TM helix 6 | 273..303 | CDD:320207 | 8/30 (27%) | ||
| TM helix 7 | 313..338 | CDD:320207 | 4/34 (12%) | ||
| Rh6 | NP_524368.5 | 7tmA_photoreceptors_insect | 48..338 | CDD:320207 | 47/233 (20%) |
| TM helix 1 | 49..75 | CDD:320207 | 4/28 (14%) | ||
| TM helix 2 | 82..108 | CDD:320207 | 7/42 (17%) | ||
| TM helix 3 | 120..150 | CDD:320207 | 10/47 (21%) | ||
| TM helix 4 | 161..181 | CDD:320207 | 4/31 (13%) | ||
| TM helix 5 | 208..237 | CDD:320207 | 6/20 (30%) | ||
| TM helix 6 | 267..297 | CDD:320207 | |||
| TM helix 7 | 306..331 | CDD:320207 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||