Protein Alignment Rh4 and opn1mw3

DIOPT Version :10

• Sequence 1: NP_476701.1
• Gene: Rh4 / 39887
• FlyBaseID: FBgn0003250
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_878312.1
• Gene: opn1mw3 / 360152
• ZFINID: ZDB-GENE-030728-6
• Length: 349
• Species: Danio rerio
• Alignment Length: 349
• Identity: 88/349 - (25%)
• Similarity: 145/349 - (41%)
• Gaps: 37/349 - (10%)

  Fly    38 YIPEHWLTQLEPPASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLI 102
            |:.|.|..:|         |.|:..||.|.....||:.:.:.:..|.||.|.|..::||||...|
Zfish    30 YLAEPWQFKL---------LAVYMFFLMCFGFPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTI 85

  Fly   103 M-CLKAPIFIYNSFHRGFALGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNRNMTFT 166
            | |....:..|.:.:..|.||.|.|.|...:.:..|..:..:...:..:||.|:.|||......:
Zfish    86 MVCFGFTVTFYTAINGYFVLGPTGCAIEGFMATLGGQISLWSLVVLAIERYIVVCKPMGSFKFSS 150

  Fly   167 KAVIMNI-IIWLYCTPWVVLPLTQFWDRFVPEGYLTSCSFDY--LSDNFDTRLFVGTIFFFSFVC 228
            ......| ..|:........||.. |.|::|||...||..||  |:.:::...:|..:|...|:.
Zfish   151 NHAFAGIGFTWIMALSCAAPPLVG-WSRYIPEGMQCSCGPDYYTLNPDYNNESYVLYMFCCHFIF 214

  Fly   229 PTLMILYYYSQIVGHVFSHEKALREQAKKMNVESLRSNVDKSKETAEIRIAKAAITICFLFFVSW 293
            |...|.:.|.::|..|    ||...|.::          .:|.:.||..:.:..|.:...|.|:|
Zfish   215 PVTTIFFTYGRLVCTV----KAAAAQQQE----------SESTQKAEREVTRMVILMVLGFLVAW 265

  Fly   294 TPYGVMSLIGAFGDKSLLTPGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCP----WLGV 354
            |||..::....|...:..:.....:||...|..:..:|.:|.:.:.::|     .|.    :.|.
Zfish   266 TPYASVAAWIFFNRGAAFSAQFMAVPAFFSKSSSIFNPIIYVLLNKQFR-----NCMLTTLFCGK 325

  Fly   355 NEKSGEISSAQSTTTQEQQQTTAA 378
            |....:.||..||:..|....:.|
Zfish   326 NPLGDDESSTVSTSKTEVSSVSPA 349

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh4	NP_476701.1	7tmA_photoreceptors_insect	55..345	CDD:320207	75/293 (26%)
		TM helix 1	56..82	CDD:320207	7/25 (28%)
		TM helix 2	89..114	CDD:320207	9/25 (36%)
		TM helix 3	126..156	CDD:320207	6/29 (21%)
		TM helix 4	166..186	CDD:320207	2/20 (10%)
		TM helix 5	214..243	CDD:320207	7/28 (25%)
		TM helix 6	273..303	CDD:320207	9/29 (31%)
		TM helix 7	313..338	CDD:320207	5/24 (21%)
opn1mw3	NP_878312.1	Rhodopsin_N	3..37	CDD:313611	3/6 (50%)
		7tm_GPCRs	39..317	CDD:475119	76/306 (25%)
		TM helix 1	40..64	CDD:410628	7/23 (30%)
		TM helix 2	73..95	CDD:410628	8/21 (38%)
		TM helix 3	111..133	CDD:410628	2/21 (10%)
		TM helix 4	155..171	CDD:410628	2/15 (13%)
		TM helix 5	201..224	CDD:410628	5/22 (23%)
		TM helix 6	251..273	CDD:410628	7/21 (33%)
		TM helix 7	285..310	CDD:410628	5/24 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	329..349		5/19 (26%)