Sequence 1: | NP_476701.1 | Gene: | Rh4 / 39887 | FlyBaseID: | FBgn0003250 | Length: | 378 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038939470.1 | Gene: | Opn5 / 316259 | RGDID: | 727869 | Length: | 533 | Species: | Rattus norvegicus |
Alignment Length: | 404 | Identity: | 99/404 - (24%) |
---|---|---|---|
Similarity: | 175/404 - (43%) | Gaps: | 69/404 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 VPPDQIQYIPEHWLTQLEPPAS-----MHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSN 90
Fly 91 MFVLNLAVFDL-IMCLKAPIFIYNSFHRGFALGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNV 154
Fly 155 ITKPMNRNMTFTK--AVIMNIIIWLYCTPWVVLPLTQFWDRFVPEGYLTSCSFDY--LSDNFDTR 215
Fly 216 LFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKKM-------------------NVE 261
Fly 262 SLRSNVDKSKE--------TAEIRIAKAAITICFLFFVSWTPYGVMSLIGAFGDKSLLTPGATMI 318
Fly 319 PACTCKLVACIDPFVYAISHPRYRL---------------------ELQKRCPWLGVNEKSGEIS 362
Fly 363 SAQSTTTQEQQQTT 376 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rh4 | NP_476701.1 | 7tmA_photoreceptors_insect | 55..345 | CDD:320207 | 82/342 (24%) |
TM helix 1 | 57..81 | CDD:320207 | 7/23 (30%) | ||
TM helix 2 | 90..111 | CDD:320207 | 8/21 (38%) | ||
TM helix 3 | 127..149 | CDD:320207 | 5/21 (24%) | ||
TM helix 4 | 170..186 | CDD:320207 | 5/15 (33%) | ||
TM helix 5 | 215..238 | CDD:320207 | 7/22 (32%) | ||
TM helix 6 | 279..301 | CDD:320207 | 8/21 (38%) | ||
TM helix 7 | 313..338 | CDD:320207 | 5/24 (21%) | ||
Opn5 | XP_038939470.1 | 7tmA_Opsin5_neuropsin | 34..353 | CDD:320202 | 82/320 (26%) |
TM helix 1 | 36..60 | CDD:320202 | 7/23 (30%) | ||
TM helix 2 | 69..91 | CDD:320202 | 8/21 (38%) | ||
TM helix 3 | 107..129 | CDD:320202 | 5/21 (24%) | ||
TM helix 4 | 151..167 | CDD:320202 | 5/15 (33%) | ||
TM helix 5 | 197..220 | CDD:320202 | 7/22 (32%) | ||
TM helix 6 | 251..310 | CDD:320202 | 14/58 (24%) | ||
TM helix 7 | 322..347 | CDD:320202 | 5/24 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D704940at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |