Protein Alignment Rh4 and Rrh

DIOPT Version :9

• Sequence 1: NP_476701.1
• Gene: Rh4 / 39887
• FlyBaseID: FBgn0003250
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_033128.1
• Gene: Rrh / 20132
• MGIID: 1097709
• Length: 337
• Species: Mus musculus
• Alignment Length: 333
• Identity: 80/333 - (24%)
• Similarity: 150/333 - (45%)
• Gaps: 32/333 - (9%)

  Fly    54 HYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDL-IMCLKAPIFIYNSFHR 117
            |.::..:.|.....|.:.|.:|:.||...|.||||:|..::|||..|: :..:..|:...:..|.
Mouse    25 HSVIAAYLIVAGITSILSNVVVLGIFIKYKELRTPTNAVIINLAFTDIGVSSIGYPMSAASDLHG 89

  Fly   118 GFALGNTWCQIFASIGSYSG-IGAGMTNAAIGYDRYNVITKP-MNRNMTFTKAVIMNIIIWLYCT 180
            .:..|:..|||:|.:..:.| :..|:. ..:..|||..|:.| :.|.||....:.|.:..|:...
Mouse    90 SWKFGHAGCQIYAGLNIFFGMVSIGLL-TVVAMDRYLTISCPDVGRRMTTNTYLSMILGAWINGL 153

  Fly   181 PWVVLPLTQFWDRFVPEGYLTSCSFDYLSDNFDTRLFVGTIFFFSFVCP-TLMILYYYSQIVGHV 244
            .|.::|:.. |..:.|:....:|:.::.:::.....:...:...:|:.| |:|...||     ||
Mouse   154 FWALMPIIG-WASYAPDPTGATCTINWRNNDTSFVSYTMMVIVVNFIVPLTVMFYCYY-----HV 212

  Fly   245 FSHEKALREQAKKMNVESL-RSNVDKSKETAEIRIAKAAITICFLFFVSWTPYGVMSLIGAFGDK 308
               .::||..|.......| |...|::.      :.|.::.:..:|.::|:||.::.|...||:.
Mouse   213 ---SRSLRLYAASDCTAHLHRDWADQAD------VTKMSVIMILMFLLAWSPYSIVCLWACFGNP 268

  Fly   309 SLLTPGATMIPACTCKLVACIDPFVYAISHPRYR---LELQKRCPWLGVNEKSGEISSAQSTTTQ 370
            ..:.|...:|.....|.....:|.:|..:|.::|   |.:.|..|.|.|.|        .||...
Mouse   269 KKIPPSMAIIAPLFAKSSTFYNPCIYVAAHKKFRKAMLAMFKCQPHLAVPE--------PSTLPM 325

  Fly   371 EQQQTTAA 378
            :..|::.|
Mouse   326 DMPQSSLA 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh4	NP_476701.1	7tmA_photoreceptors_insect	55..345	CDD:320207	70/297 (24%)
		TM helix 1	57..81	CDD:320207	6/23 (26%)
		TM helix 2	90..111	CDD:320207	6/21 (29%)
		TM helix 3	127..149	CDD:320207	5/22 (23%)
		TM helix 4	170..186	CDD:320207	3/15 (20%)
		TM helix 5	215..238	CDD:320207	5/23 (22%)
		TM helix 6	279..301	CDD:320207	5/21 (24%)
		TM helix 7	313..338	CDD:320207	5/24 (21%)
Rrh	NP_033128.1	7tm_1	43..294	CDD:278431	64/266 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG48050
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920