DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh4 and taar15

DIOPT Version :10

Sequence 1:NP_476701.1 Gene:Rh4 / 39887 FlyBaseID:FBgn0003250 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001076508.1 Gene:taar15 / 100034377 ZFINID:ZDB-GENE-041014-50 Length:328 Species:Danio rerio


Alignment Length:326 Identity:86/326 - (26%)
Similarity:142/326 - (43%) Gaps:59/326 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 HWLTQLEPPASMHYMLGVFYIFLF-------CASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVF 99
            ||.|.    .|:.:.|....:|||       ..:..||.:||...:..|.|.||:|:.:|:||:.
Zfish    11 HWNTS----CSLDFHLSYVNVFLFLYISAISVLTVCGNLLVIVSITVFKQLHTPTNLLILSLAIS 71

  Fly   100 DLI--MCLKAPIFIYNSFHRGFALGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPM--N 160
            ||:  :|| .|:....|.:..|.:|.:.|.||.||.|..|..:.|....:..|||..:..|:  .
Zfish    72 DLLVGICL-MPVESIRSINSCFYMGKSHCHIFHSIMSIVGSASLMNIMLVAIDRYFAVCNPLLYM 135

  Fly   161 RNMTFTKAVIMNIIIWLYCTPWVVLPLTQFWDRFVPEGYLTSCSFD---YLSDNFDTRLFVGTIF 222
            ..||..||:|...:.|.....:.::|:.  .....|.|.:..|..:   .:|:::.....:    
Zfish   136 SKMTIRKALICVCLGWTVSICYNLVPVN--LGNSDPTGAVVVCLRECAVAVSNSWGPADLI---- 194

  Fly   223 FFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKKMNVESLRSNVDKSKETAEIRIAKAAITICF 287
             .||:.|.:|:|..|::|:.......||:....||        |..:....:|::..|...||.|
Zfish   195 -VSFIAPCIMMLILYTRILTVALKQAKAISNMTKK--------NGSQPSRKSEVKATKTLSTIIF 250

  Fly   288 LFFVSWTPYGVMSL-----------IGAFGDKSLLTPGATMIPACTCKLVACIDPFVYAISHPRY 341
            ::|:.|.|:.|:.|           |.||              .|.....:||:||:||||:|.:
Zfish   251 VYFICWIPWYVIMLNMEQFNKLPVSISAF--------------LCLFYTNSCINPFIYAISYPWF 301

  Fly   342 R 342
            :
Zfish   302 K 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh4NP_476701.1 7tmA_photoreceptors_insect 55..345 CDD:320207 82/313 (26%)
TM helix 1 56..82 CDD:320207 8/32 (25%)
TM helix 2 89..114 CDD:320207 9/26 (35%)
TM helix 3 126..156 CDD:320207 11/29 (38%)
TM helix 4 166..186 CDD:320207 4/19 (21%)
TM helix 5 214..243 CDD:320207 7/28 (25%)
TM helix 6 273..303 CDD:320207 10/40 (25%)
TM helix 7 313..338 CDD:320207 8/24 (33%)
taar15NP_001076508.1 7tmA_TAARs 27..305 CDD:320183 81/306 (26%)
TM helix 1 28..54 CDD:320183 7/25 (28%)
TM helix 2 61..87 CDD:320183 9/26 (35%)
TM helix 3 99..129 CDD:320183 11/29 (38%)
TM helix 4 141..164 CDD:320183 5/24 (21%)
TM helix 5 185..214 CDD:320183 8/33 (24%)
TM helix 6 236..266 CDD:320183 10/29 (34%)
TM helix 7 273..298 CDD:320183 11/38 (29%)

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