DRSC/TRiP Functional Genomics Resources

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Protein Alignment sinah and AT1G66610

DIOPT Version :10

Sequence 1:NP_648927.1 Gene:sinah / 39885 FlyBaseID:FBgn0259794 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_176834.1 Gene:AT1G66610 / 842979 AraportID:AT1G66610 Length:366 Species:Arabidopsis thaliana


Alignment Length:390 Identity:83/390 - (21%)
Similarity:134/390 - (34%) Gaps:128/390 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VVKRQSPDAAAAGELVPS-----RRKDSVAVQSGIVATGPLDTTRSGARDDFLMALLECPVCFGY 112
            :||..:.:.|.|.|...|     :|..|:..:.|....|.: ..|||..  |.:.||:||:|...
plant     1 MVKGTNAEQALAREEASSSRPKRQRVPSIVEEEGENGGGDV-VVRSGTL--FELDLLDCPICCNA 62

  Fly   113 IMPPIMQCPRGHLICSTCRSKLT-ICPVCRVFMTNIRSLAMEKVASKLIFPC------------- 163
            :..||.||.:||:.||:|.:.:: .||.|.:.:.|.||..||:|....|..|             
plant    63 LTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRSRIMERVVEAFIVRCPIVAGEASSSRQK 127

  Fly   164 -----------------------------------------KHSHF-----------GCRARLSY 176
                                                     |.|.|           ||....||
plant   128 RLRVPSIDEENGENGGRDVVVPSGTLSQLDLLDCPVCSKALKISIFQQSLFLAKRQNGCTETFSY 192

  Fly   177 AEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMSSHENVITMEGNDIIFLATNVNLEGAL 241
            ..:..||:.|.....:||.|:  |::.|..:|:|.|..::|:.:                     
plant   193 GNELVHEKKCSFALCYCPAPN--CNYAGVYKDLYSHYAANHKKL--------------------- 234

  Fly   242 DWTMVQSCHGRHFLLSLEKINLGEDCQQY-------------------FTACRMIGSMKDAAEFV 287
             ||.....:..|..:..|..:|  ..|||                   :|...:..|.....:|.
plant   235 -WTRFSCGYSMHVCMDFESKSL--VLQQYSDGPLVVLQCFKEPPQGLFWTVNCIAPSAPGVGKFS 296

  Fly   288 YNISLEAYNRTLRWQSKPRSIRENFSSFT-NADFLVLNKH---TVELFSEDGNLALNVVIRKVEE 348
            |.:|......||.::|...:..:..|..| ..||:.:.::   .:.|:.     ...:.||.:||
plant   297 YELSYSTAGNTLTFRSSEMNRIQKVSFQTPEKDFMFIPEYILCPMGLYK-----GTYICIRSLEE 356

  Fly   349  348
            plant   357  356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinahNP_648927.1 RING_Ubox 102..151 CDD:473075 20/49 (41%)
Sina 147..341 CDD:460824 47/281 (17%)
AT1G66610NP_176834.1 RING-HC_SIAHs 54..92 CDD:438233 15/37 (41%)
Sina 185..>313 CDD:460824 31/153 (20%)

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