DRSC/TRiP Functional Genomics Resources

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Protein Alignment sinah and siah1

DIOPT Version :9

Sequence 1:NP_648927.1 Gene:sinah / 39885 FlyBaseID:FBgn0259794 Length:351 Species:Drosophila melanogaster
Sequence 2:XP_005159200.1 Gene:siah1 / 80955 ZFINID:ZDB-GENE-010319-31 Length:334 Species:Danio rerio


Alignment Length:293 Identity:134/293 - (45%)
Similarity:184/293 - (62%) Gaps:17/293 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VKRQSPDAAAAG--ELVPSRRKDSVAVQSGIVATGPLDTTRSGARDDFLMALLECPVCFGYIMPP 116
            :.||:..|...|  :..||:|   |...||        ||.|.:.   |.:|.||||||.|::||
Zfish    53 MSRQTATALPTGTSKCPPSQR---VPTLSG--------TTASNSD---LASLFECPVCFDYVLPP 103

  Fly   117 IMQCPRGHLICSTCRSKLTICPVCRVFMTNIRSLAMEKVASKLIFPCKHSHFGCRARLSYAEKTK 181
            |:||..|||:||.||.|||.||.||..:.:||:|||||||:.::||||::..||...|.:.:|.:
Zfish   104 ILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAE 168

  Fly   182 HEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMSSHENVITMEGNDIIFLATNVNLEGALDWTMV 246
            |||.||.|||.||.|...|.|||.|..|..||:..|:::.|::|.||:||||::||.||:||.|:
Zfish   169 HEELCEFRPYSCPCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMM 233

  Fly   247 QSCHGRHFLLSLEKINLGEDCQQYFTACRMIGSMKDAAEFVYNISLEAYNRTLRWQSKPRSIREN 311
            |||.|.||:|.|||....:..||:|...::||:.|.|..|.|.:.|..:.|.|.|::.||||.|.
Zfish   234 QSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEG 298

  Fly   312 F-SSFTNADFLVLNKHTVELFSEDGNLALNVVI 343
            . ::..|:|.||.:....:||:|:|||.:||.|
Zfish   299 IATAIMNSDCLVFDTSIAQLFAENGNLGINVTI 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinahNP_648927.1 zf-C3HC4 106..140 CDD:278524 23/33 (70%)
Sina 147..341 CDD:281181 90/194 (46%)
siah1XP_005159200.1 Sina 134..330 CDD:281181 91/195 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3002
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60089
OrthoDB 1 1.010 - - D780610at2759
OrthoFinder 1 1.000 - - FOG0001170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104798
Panther 1 1.100 - - O PTHR45877
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X796
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.790

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