DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sinah and Cpr65Ea

DIOPT Version :9

Sequence 1:NP_648927.1 Gene:sinah / 39885 FlyBaseID:FBgn0259794 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_648075.1 Gene:Cpr65Ea / 38773 FlyBaseID:FBgn0035735 Length:127 Species:Drosophila melanogaster


Alignment Length:88 Identity:20/88 - (22%)
Similarity:30/88 - (34%) Gaps:35/88 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 CSWQGPLRDVYQHLMSSHENVITMEGNDIIFLATNVNLEGALDWTMVQS--------------CH 250
            |:...||.|          :.||.      ||| |.:.:|...:.:.|:              .|
  Fly    13 CALAAPLND----------DTITK------FLA-NQDTDGTYAYDIEQASGIQIKEEGLAGHEAH 60

  Fly   251 GRHFLLSLEKINLGEDCQQYFTA 273
            |.:..:|.|    |...|..:||
  Fly    61 GSYSYISPE----GIPVQVVYTA 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinahNP_648927.1 zf-C3HC4 106..140 CDD:278524
Sina 147..341 CDD:281181 20/88 (23%)
Cpr65EaNP_648075.1 Chitin_bind_4 37..84 CDD:306811 9/47 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S11711
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.950

Return to query results.
Submit another query.