DRSC/TRiP Functional Genomics Resources

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Protein Alignment sinah and Siah3

DIOPT Version :9

Sequence 1:NP_648927.1 Gene:sinah / 39885 FlyBaseID:FBgn0259794 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001121565.1 Gene:Siah3 / 380918 MGIID:2685758 Length:268 Species:Mus musculus


Alignment Length:265 Identity:77/265 - (29%)
Similarity:121/265 - (45%) Gaps:38/265 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 CFGYIMPPI-----------MQCPRGHLICSTCRSKLTICPVCRV-FMTNIRSLAMEKVASKLIF 161
            |||.::..|           :....|.|:|       .:.|...: ::::.|.:...........
Mouse     7 CFGAVLDLIHLRFQHYKAKRVFSAAGQLVC-------VVNPTHNLKYVSSRRGITQNSAEQGSFH 64

  Fly   162 P----------CKHSHFGCRAR---LSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHL 213
            |          |.|:|....||   |.:.|...|  :.:..|..||.  ..|.|:|.|..|..||
Mouse    65 PHHLPHHHRHHCHHNHLYQHARPHHLHHQEPGLH--NSQVTPCICPL--FSCQWEGHLEVVVPHL 125

  Fly   214 MSSHENVITMEGNDIIFLATNVNLEGALDWTMVQSCHGRHFLLSLEKINLGEDCQQYFTACRMIG 278
            ...| .:..::|.:|:||||:::|....||.::.||.|.||||.|.|....|...|:|....:||
Mouse   126 RQIH-RIDILQGAEIVFLATDMHLPAPADWIIMHSCLGHHFLLVLRKQERHEGHPQFFATMMLIG 189

  Fly   279 SMKDAAEFVYNISLEAYNRTLRWQSKPRSIRENFSS-FTNADFLVLNKHTVELFSEDGNLALNVV 342
            :...|..|.|.:.|...:|.|:|::.|||:.|...| .|:.|.||||....:|||::|:||:.:.
Mouse   190 TPTQADCFTYRLELNRNHRRLKWEATPRSVLECVDSVITDGDCLVLNTSLAQLFSDNGSLAIGIA 254

  Fly   343 IRKVE 347
            |.:.:
Mouse   255 ITETD 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinahNP_648927.1 zf-C3HC4 106..140 CDD:278524 8/41 (20%)
Sina 147..341 CDD:281181 68/207 (33%)
Siah3NP_001121565.1 Sina 131..256 CDD:239753 47/124 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3002
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D780610at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45877
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.880

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