Protein Alignment sinah and Siah1

DIOPT Version :9

• Sequence 1: NP_648927.1
• Gene: sinah / 39885
• FlyBaseID: FBgn0259794
• Length: 351
• Species: Drosophila melanogaster
• Sequence 2: XP_038953364.1
• Gene: Siah1 / 140941
• RGDID: 620449
• Length: 347
• Species: Rattus norvegicus
• Alignment Length: 323
• Identity: 138/323 - (42%)
• Similarity: 194/323 - (60%)
• Gaps: 35/323 - (10%)

  Fly    22 IDTPTASGEMLTRRQSAPALVVPPEETTHVVVVKRQSPDAAAAGELVPSRRKDSVAVQSGIVATG 86
            :.|.|..|:.:: ||:|.||   |..|:                :..||:|..::
  Rat    56 VGTRTRKGKEMS-RQTATAL---PTGTS----------------KCPPSQRVPAL---------- 90

  Fly    87 PLDTTRSGARDDFLMALLECPVCFGYIMPPIMQCPRGHLICSTCRSKLTICPVCRVFMTNIRSLA 151
                |.:.|.::.|.:|.||||||.|::|||:||..|||:||.||.|||.||.||..:.:||:||
  Rat    91 ----TGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLA 151

  Fly   152 MEKVASKLIFPCKHSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMSS 216
            |||||:.::||||::..||...|.:.||.:|||.||.|||.||.|...|.|||.|..|..|||..
  Rat   152 MEKVANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQ 216

  Fly   217 HENVITMEGNDIIFLATNVNLEGALDWTMVQSCHGRHFLLSLEKINLGEDCQQYFTACRMIGSMK 281
            |:::.|::|.||:||||::||.||:||.|:|||.|.||:|.|||....:..||:|...::||:.|
  Rat   217 HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRK 281

  Fly   282 DAAEFVYNISLEAYNRTLRWQSKPRSIRENF-SSFTNADFLVLNKHTVELFSEDGNLALNVVI 343
            .|..|.|.:.|..:.|.|.|::.||||.|.. ::..|:|.||.:....:||:|:|||.:||.|
  Rat   282 QAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTI 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sinah	NP_648927.1	zf-C3HC4	106..140	CDD:278524	23/33 (70%)
		Sina	147..341	CDD:281181	92/194 (47%)
Siah1	XP_038953364.1	RING-HC_SIAH1	104..143	CDD:319665	26/38 (68%)
		Sina	147..343	CDD:397316	93/195 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3002
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG60089
OrthoDB	1	1.010	-	-		D780610at2759
OrthoFinder	1	1.000	-	-		FOG0001170
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_104798
Panther	1	1.100	-	-	O	PTHR45877
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X796
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	10	9.790