DRSC/TRiP Functional Genomics Resources

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Protein Alignment sinah and Siah2

DIOPT Version :10

Sequence 1:NP_648927.1 Gene:sinah / 39885 FlyBaseID:FBgn0259794 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_604452.1 Gene:Siah2 / 140593 RGDID:620778 Length:325 Species:Rattus norvegicus


Alignment Length:343 Identity:143/343 - (41%)
Similarity:197/343 - (57%) Gaps:29/343 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SRPQLSWPERVSPQRTIDTPTASGEMLTRRQSAPALVVPPEETTHVVVVKRQSPDAAAAGELVPS 70
            |||..:.|....|......|       .:...||:...||...|    :....|.::|    ||:
  Rat     2 SRPSSTGPSANKPCSKQPPP-------PQTPHAPSPAAPPAAAT----ISAAGPGSSA----VPA 51

  Fly    71 RRKDSVAVQSGIVA---TGPLDTTRSGARDDFLMALLECPVCFGYIMPPIMQCPRGHLICSTCRS 132
                :.||.||..|   .||:     ..:...|.:|.||||||.|::|||:||..|||:|:.||.
  Rat    52 ----AAAVISGPGAGGGAGPV-----SPQHHELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQ 107

  Fly   133 KLTICPVCRVFMT-NIRSLAMEKVASKLIFPCKHSHFGCRARLSYAEKTKHEEDCECRPYFCPYP 196
            ||:.||.||..:| :||:||||||||.::||||::..||...|.:.||.:||:.||.|||.||.|
  Rat   108 KLSCCPTCRGALTPSIRNLAMEKVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCP 172

  Fly   197 DDKCSWQGPLRDVYQHLMSSHENVITMEGNDIIFLATNVNLEGALDWTMVQSCHGRHFLLSLEKI 261
            ...|.|||.|..|..|||.:|:::.|::|.||:||||::||.||:||.|:|||.|.||:|.|||.
  Rat   173 GASCKWQGSLEAVMSHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQ 237

  Fly   262 NLGEDCQQYFTACRMIGSMKDAAEFVYNISLEAYNRTLRWQSKPRSIRENF-SSFTNADFLVLNK 325
            ...|..||:|....:||:.|.|..|.|.:.|....|.|.|::.||||.:.. ::..|:|.||.:.
  Rat   238 EKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDT 302

  Fly   326 HTVELFSEDGNLALNVVI 343
            ....||:::|||.:||.|
  Rat   303 AIAHLFADNGNLGINVTI 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinahNP_648927.1 RING_Ubox 102..151 CDD:473075 28/49 (57%)
Sina 147..341 CDD:460824 91/194 (47%)
Siah2NP_604452.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43 11/51 (22%)
RING-HC_SIAH2 76..126 CDD:438410 28/49 (57%)
Sina 123..319 CDD:460824 92/195 (47%)
SBD. /evidence=ECO:0000250|UniProtKB:P61092 131..323 87/190 (46%)

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