Protein Alignment sina and AT1G66620

DIOPT Version :10

• Sequence 1: NP_476725.1
• Gene: sina / 39884
• FlyBaseID: FBgn0003410
• Length: 314
• Species: Drosophila melanogaster
• Sequence 2: NP_176835.1
• Gene: AT1G66620 / 842980
• AraportID: AT1G66620
• Length: 313
• Species: Arabidopsis thaliana
• Alignment Length: 166
• Identity: 45/166 - (27%)
• Similarity: 64/166 - (38%)
• Gaps: 41/166 - (24%)

  Fly    97 RKMTTTRGLSLSLGEQILD---QGYSMGKSLTEKNLKDLAAKGGQSYAVNVVLTSADVTVQ-GFC 157
            |:..|.|  .|:.|.:|||   :|.....||||     :.|:.|        .....:.:| ..|
plant    13 RRSPTNR--KLTTGCEILDGCLRGGISCDSLTE-----IVAESG--------CGKTQLCLQLSLC 62

  Fly   158 MNRCGSHGTGSGSGKKGSRFAYIWVGNSETQCP----GQCAWPFHAPVYGPQSPPLVAPN-NDVG 217
            .....|||..:||.      .|:   :||...|    .|.:..||      ||.|.:..| ||..
plant    63 TQLPISHGGLNGSS------LYL---HSEFPFPFRRLHQLSHTFH------QSNPSIYANYNDNP 112

  Fly   218 LDGMVI-NLASLMAATATNPFGDGYYQGPKTA-PLE 251
            .|.:.: |:.|:.......|..||:....||. ||:
plant   113 CDHVFVQNVHSVDHLFDIMPRIDGFVGNSKTRFPLK 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sina	NP_476725.1	RING_Ubox	68..118	CDD:473075	8/23 (35%)
		Sina	114..310	CDD:460824	39/149 (26%)
AT1G66620	NP_176835.1	RING-HC_SIAHs	42..79	CDD:438233	11/55 (20%)
		Sina	87..>163	CDD:460824	19/68 (28%)