Protein Alignment sina and AT1G66610

DIOPT Version :10

• Sequence 1: NP_476725.1
• Gene: sina / 39884
• FlyBaseID: FBgn0003410
• Length: 314
• Species: Drosophila melanogaster
• Sequence 2: NP_176834.1
• Gene: AT1G66610 / 842979
• AraportID: AT1G66610
• Length: 366
• Species: Arabidopsis thaliana
• Alignment Length: 204
• Identity: 48/204 - (23%)
• Similarity: 71/204 - (34%)
• Gaps: 75/204 - (36%)

  Fly    57 GGGD----AGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLT-CCPTCRGPLANIRN 116
            ||||    :|...:| .|.:||:|.:.:..||.||..||:.|.||.:.:: .||.|...:.|.|:
plant    37 GGGDVVVRSGTLFEL-DLLDCPICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRS 100

  Fly   117 LAMEKV--------------ASNVK---------------------------------------- 127
            ..||:|              ||:.:
plant   101 RIMERVVEAFIVRCPIVAGEASSSRQKRLRVPSIDEENGENGGRDVVVPSGTLSQLDLLDCPVCS 165

  Fly   128 ------------FPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHL 180
                        |..|... |||.:..|..:..||:.|...  ||.||..:|.:.|....:..|.
plant   166 KALKISIFQQSLFLAKRQN-GCTETFSYGNELVHEKKCSFA--LCYCPAPNCNYAGVYKDLYSHY 227

  Fly   181 MMSHKSITT 189
            ..:||.:.|
plant   228 AANHKKLWT 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sina	NP_476725.1	RING_Ubox	68..118	CDD:473075	18/50 (36%)
		Sina	114..310	CDD:460824	25/142 (18%)
AT1G66610	NP_176834.1	RING-HC_SIAHs	54..92	CDD:438233	14/37 (38%)
		Sina	185..>313	CDD:460824	17/54 (31%)