DRSC/TRiP Functional Genomics Resources

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Protein Alignment sina and SINAT2

DIOPT Version :9

Sequence 1:NP_001287089.1 Gene:sina / 39884 FlyBaseID:FBgn0003410 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001326739.1 Gene:SINAT2 / 824973 AraportID:AT3G58040 Length:308 Species:Arabidopsis thaliana


Alignment Length:307 Identity:95/307 - (30%)
Similarity:147/307 - (47%) Gaps:44/307 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 STSTGSSSAGNTSSANTSSSSSSSLSSAGGGDAGMSAD--LTSLFECPVCFDYVLPPILQCSSGH 91
            |.|||......|:....:::..:...|||.|..|:.::  :..|.|||||.:.:.|||.||.:||
plant    14 SNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGH 78

  Fly    92 LVCVSCRSKL-TCCPTCRGPLANIRNLAMEKVASNVKFPCKHSGYGCTASLVYTEKTEHEETCEC 155
            .:|.:|:.:: ..|||||..|.|||.||:||||.:::.||::...||.....|..|.:||:.|..
plant    79 TLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRF 143

  Fly   156 RPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQG---------------EDIVFLATDINLP 205
            |||.||..|:.|...|.:..::.||...|| :....|               |:..::.|..|  
plant   144 RPYTCPYAGSECSVTGDIPTLVVHLKDDHK-VDMHDGCTFNHRYVKSNPHEVENATWMLTVFN-- 205

  Fly   206 GAVDWVMMQSCFGHHFMLVLEKQEKYDGHQ-----QFFAIVQLIGSRKEAENFVYRLELNGNRRR 265
                      |||..|.|      .::..|     .:.|.::.:|...||:.|.|.||:..:.|:
plant   206 ----------CFGRQFCL------HFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRK 254

  Fly   266 LTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFA--DNGNLGINVT 310
            |||:.:||||.:.......:.|.|:...::|..|:  |...|.:.||
plant   255 LTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVT 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinaNP_001287089.1 Sina 114..310 CDD:281181 61/217 (28%)
SINAT2NP_001326739.1 RING-HC_SIAHs 58..96 CDD:319485 17/37 (46%)
Sina 102..301 CDD:397316 61/217 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 106 1.000 Domainoid score I2183
eggNOG 1 0.900 - - E1_KOG3002
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 159 1.000 Inparanoid score I1644
OMA 1 1.010 - - QHG60089
OrthoDB 1 1.010 - - D780610at2759
OrthoFinder 1 1.000 - - FOG0001170
OrthoInspector 1 1.000 - - mtm1132
orthoMCL 1 0.900 - - OOG6_104798
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X796
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.740

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