Protein Alignment sina and AT2G41980

DIOPT Version :10

• Sequence 1: NP_476725.1
• Gene: sina / 39884
• FlyBaseID: FBgn0003410
• Length: 314
• Species: Drosophila melanogaster
• Sequence 2: NP_181729.1
• Gene: AT2G41980 / 818798
• AraportID: AT2G41980
• Length: 305
• Species: Arabidopsis thaliana
• Alignment Length: 328
• Identity: 97/328 - (29%)
• Similarity: 145/328 - (44%)
• Gaps: 73/328 - (22%)

  Fly    16 AAGAGATGV----------ATNTSTSTGSSSAGNTSSANTSSSSSSSLSSAGGGDAGMSADLTSL 70
            |..:.:|||          |.:..|.:||.|.|...|:|                     .:..|
plant    11 ALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKFHSSN---------------------GVYEL 54

  Fly    71 FECPVCFDYVLPPILQCSSGHLVCVSCRSKL-TCCPTCRGPLANIRNLAMEKVASNVKFPCKHSG 134
            .|||||.:.:.|||.||.:||.:|.||:.:: ..|||||..|.|||.||:||||.:::.||::..
plant    55 LECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQN 119

  Fly   135 YGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQG------- 192
            .||.....|..|.:||:.|..|.|.||..|:.|...|.:..::.||...|| :....|
plant   120 LGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHK-VDMHDGCTFNHRY 183

  Fly   193 --------EDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQ-----QFFAIVQLI 244
                    |:..::.|..|            |||..|.|      .::..|     .:.|.::.:
plant   184 VKSNPHEVENATWMLTVFN------------CFGRQFCL------HFEAFQLGMAPVYMAFLRFM 230

  Fly   245 GSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLF--ADNGNLGI 307
            |...||:.|.|.||:..:.|:|||:.:||||.:.......:.|.|:...::|..|  :|...|.:
plant   231 GDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKL 295

  Fly   308 NVT 310
            .||
plant   296 RVT 298

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sina	NP_476725.1	RING_Ubox	68..118	CDD:473075	25/50 (50%)
		Sina	114..310	CDD:460824	60/217 (28%)
AT2G41980	NP_181729.1	RING-HC_SIAHs	55..93	CDD:438233	18/37 (49%)
		Sina	99..298	CDD:460824	60/217 (28%)