DRSC/TRiP Functional Genomics Resources

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Protein Alignment sina and siah1

DIOPT Version :9

Sequence 1:NP_001287089.1 Gene:sina / 39884 FlyBaseID:FBgn0003410 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_005159200.1 Gene:siah1 / 80955 ZFINID:ZDB-GENE-010319-31 Length:334 Species:Danio rerio


Alignment Length:288 Identity:215/288 - (74%)
Similarity:240/288 - (83%) Gaps:11/288 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TNTSTSTGSSSAGNTSSANTSSSSSSSLSSAGGGDAGMSADLTSLFECPVCFDYVLPPILQCSSG 90
            |.|:..||:|....:....|.|.:::|           ::||.|||||||||||||||||||.||
Zfish    57 TATALPTGTSKCPPSQRVPTLSGTTAS-----------NSDLASLFECPVCFDYVLPPILQCQSG 110

  Fly    91 HLVCVSCRSKLTCCPTCRGPLANIRNLAMEKVASNVKFPCKHSGYGCTASLVYTEKTEHEETCEC 155
            ||||.:||.||||||||||||.:||||||||||::|.||||::..||..:|.:|:|.||||.||.
Zfish   111 HLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEF 175

  Fly   156 RPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHH 220
            |||.||||||||||||.||.||.||:..|||||||||||||||||||||||||||||||||||.|
Zfish   176 RPYSCPCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH 240

  Fly   221 FMLVLEKQEKYDGHQQFFAIVQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHN 285
            |||||||||||||||||||||||||:||:||||.|||||||:||||||||.|||||||:|:||.|
Zfish   241 FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMN 305

  Fly   286 SDCLVFDTSIAQLFADNGNLGINVTISL 313
            |||||||||||||||:|||||||||||:
Zfish   306 SDCLVFDTSIAQLFAENGNLGINVTISM 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinaNP_001287089.1 Sina 114..310 CDD:281181 162/195 (83%)
siah1XP_005159200.1 Sina 134..330 CDD:281181 162/195 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 348 1.000 Domainoid score I997
eggNOG 1 0.900 - - E1_KOG3002
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20654
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60089
OrthoDB 1 1.010 - - D780610at2759
OrthoFinder 1 1.000 - - FOG0001170
OrthoInspector 1 1.000 - - otm26195
orthoMCL 1 0.900 - - OOG6_104798
Panther 1 1.100 - - LDO PTHR45877
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2793
SonicParanoid 1 1.000 - - X796
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.820

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