DRSC/TRiP Functional Genomics Resources

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Protein Alignment sina and siah2l

DIOPT Version :9

Sequence 1:NP_001287089.1 Gene:sina / 39884 FlyBaseID:FBgn0003410 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_956721.2 Gene:siah2l / 378728 ZFINID:ZDB-GENE-030922-1 Length:330 Species:Danio rerio


Alignment Length:326 Identity:222/326 - (68%)
Similarity:252/326 - (77%) Gaps:24/326 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PTAAAAGAGATGV----------ATNTSTSTGSSSAGNTSSANTSSSSSSSLSSAGGGDA----- 61
            |::|...||..|.          :..|:.|..:::|...::|..::::..|.|.||.|..     
Zfish     4 PSSAGGAAGGLGAGKAGGSKHGGSGGTTASAAAAAAAAAAAAAAAAAAGVSGSVAGSGTVPAAAV 68

  Fly    62 --------GMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPLA-NIRNL 117
                    |.|.:||:||||||||||||||||||.:|||||..||.||:|||||||||. :||||
Zfish    69 ALPVAALPGQSPELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIRNL 133

  Fly   118 AMEKVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMM 182
            |||||||.:.||||:|..||..||.::||.||||.||.|||.||||||||||||.|:.||.|||.
Zfish   134 AMEKVASTLPFPCKYSSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSLEEVMPHLMH 198

  Fly   183 SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSR 247
            :||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||.|||:|
Zfish   199 AHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLIGTR 263

  Fly   248 KEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFADNGNLGINVTIS 312
            |:||||.||||||||||||||||.|||||:|||:||.||||||||||||.|||||||||||||||
Zfish   264 KQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSIAHLFADNGNLGINVTIS 328

  Fly   313 L 313
            :
Zfish   329 M 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinaNP_001287089.1 Sina 114..310 CDD:281181 164/195 (84%)
siah2lNP_956721.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 5/21 (24%)
Sina 130..326 CDD:281181 164/195 (84%)
SBD 138..330 160/192 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594298
Domainoid 1 1.000 348 1.000 Domainoid score I997
eggNOG 1 0.900 - - E1_KOG3002
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 452 1.000 Inparanoid score I1580
OMA 1 1.010 - - QHG60089
OrthoDB 1 1.010 - - D780610at2759
OrthoFinder 1 1.000 - - FOG0001170
OrthoInspector 1 1.000 - - otm26195
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45877
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X796
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.870

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